Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | DALLRMQWKWLSSGIYFATAGTNIFGKRVFATTRAHYFDFAGFLKLETKSGDPYTHLLTGLNAGVEARVYIPLTYIRYRNNGGYELNGAVPPGTINMPILGKAWCSYRIPLGSHAWLAPHTSVLGTTNRFNIINPAGNLLNERALQYQVGLTFSPFEKVELSAQWEQGVLADAPYMGIAESIWSERHFGTLVCGMKVTW |
1 | 3qraA | 0.04 | 0.03 | 0.75 | 0.70 | DisCoVER | | -----MEGESSISIGYAQSRVKEDGYKLDK------NPRGFNLKYRY------EF-NN--DWGVIGSFAQTRR-GF---------EESVLIDGDFKYYSVTAGPVFRIN-----EYVSLYGLLGAGHGKAKFSSFGQSESRSKTSLAYGAGLQ-FNPHP-NFV-I----D------ASYEYSKLDDVKVGTWMLGAGR- |
2 | 5fp1A | 0.02 | 0.02 | 0.75 | 0.67 | DEthreader | | VTTADTLGAG-----NGDRPFSSESSMYNRVQVEINMLQTDPDSGIPY-----AQGKPA----YGWDFQKQE--NHIGTIKLNTA----M--YAKSKNDYVWTNDKGNVG----GLVWHRLNSAIT-DS-ETFTDEYSK-QKTD-KGGYIGWCTSLNGP-VPY-------NINNYFTKAYAS--------H-YAT-A-- |
3 | 1uynX | 0.04 | 0.03 | 0.82 | 0.87 | CEthreader | | HNGTGLRVIAQTQQDGGTWEQGGVEG----------KMRGSTQTVGIA------AKTGENTTAAATLGMGRSTWSENS--------------ANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAEGSVNGTLMQLGALGGVNEGGLRYDLLKQDAFA------EKGSALGWSGNSLTEGTLVGL |
4 | 1uynX | 0.07 | 0.06 | 0.81 | 0.98 | EigenThreader | | DHNGTGLRVIAQTQQDGG--------TWEQGG-VEGKMRGSTQTVGIAAN---------TTAAATLGMGRSTWSEN---------------SANAKTDSISLFAGIRHDGDI--GYLKGLFSYGRYKNSISGADEHAEGSVNGTLMQLGALGGVNVPVEGGLRYDLLKQDA---FAEKGSWSGNSLTEGTLVGLAGLKL |
5 | 6h3iF | 0.07 | 0.07 | 0.98 | 0.34 | HHpred | | -SAFAGSFRYFGFGGIELRERE-VNPNALYSLKLSETFSMAVAARYIRSNLKVSAAGSFAVDVAGFYQSEGRWRAFNIQNLGP-KISYDDDLSANFLPANLRVGGGFDFIFDDYNKLGVSLELTKLLVPTPPGDIFKSFGDEKEITYSAAAEYMYQDAFAMRLGYYHESPMKGQFAGFKVSYLKNPLENTLRFSLTFNF |
6 | 6h3iF | 0.10 | 0.08 | 0.79 | 0.62 | MRFsearch | | --SMAVAARYIRSNLKVATEEIDA------SAAGSFAVDVAGFYQSEE------------GRWRAGFNIQNLGPKISYDHD---------DLSANFLPANLRVGGGFDFIFDDYNKLGVSLELTKLLANYKKYKDIGWVSGLKEITYSAAAEYMYQDAFAMRLGYYHES-------------PMKGAKQFFSLGAGFKY |
7 | 3qq2A | 0.14 | 0.14 | 0.98 | 0.50 | FFAS-3D | | DA----GGPWARTFSERQQISNAYIGLDRGWSASGGRWYLLGYTYADRTYPGDGGGKVKGLHVGGYLDTVLRLGRYDQQYNIAGTDGGRVTADYRTSGAAWSLEGGRRFELPNDWFAEPQAEVLWRTSGKRYRASNGKVDANTATLGRLGLRFGRRIQPYARLGWTQGALGKGHNLYASYEYAAGDRINIFHAGYRYSF |
8 | 3gf6A | 0.09 | 0.09 | 0.91 | 0.64 | SPARKS-K | | GEEDVLVARSFNEEDYVLDTIAQYPN----DPTLGK----LTFIDLKNQQKDQNVADFNGVGSKLTSLGYKDGNYPSESQVPIYTSQDV----TAKYAVKLRLKGELLVSGDE--WIYVYAQLASLFQPY----PPANFPEVFCKGGKLGTFDSFRRTCTFDITYDRSDLSSQLYFNLFINLAGQKRENRVRLRIELYE |
9 | 1n1sA | 0.11 | 0.09 | 0.78 | 0.99 | CNFpred | | --IRERVVHSFRIPTIVNVDGVMVAIADARYETSFDNSFIETAVKYSVDDGA------------WNTQIAIKNS-------------------ASSVSRVMDATVIVKG---NKLYILVG--SFNKTRNSWTQHRDG--SDWEPLLVVGEVTKSA-GKTTATISWGKPVSL-ILTKEFVGGVGAAI-NGNLVYPVQIAD |
10 | 6ofrA | 0.02 | 0.02 | 0.83 | 0.83 | DEthreader | | SSATNISGMSQYDAKIKRFNFGV----KFTWF-S-THDLTLKYTGSSRDYNTSTFPQSDREMGNKSYGLA-WDM--DT-QLA-------WAKLRTTVGWDHISDYTRHHDIWYGGLGHISQAVDNYTFKTRL-------AEYIYSDAWTERHNQSEIYHGKGRLI-NDYDLSNH-N-------RYYGGNILDLRRNWTS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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