Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MRYDQALVISLYFGVFQALMPLIGWLLGTSFSRYIQAFDHWIAFVLLAFLGGKMLWDVFHEKEDGEQESAERRLDHRELFMLAIATSIDALAVGIAFACLDVNIWSSISIIGVTTLVISFAGVWIGNRFGNRFQKKAEIAGGLVLILIGVKIL |
1 | 5tsaA | 0.11 | 0.10 | 0.92 | 1.00 | DEthreader | | --NRVHVGYAVLGGAAGFAATALGALMALLRAISARTQD-AMLGFAAGMMLAASAFSILPLDAT-----F-TGDL--IGLPLTSAIAIQDVPEGLAVALALRAVLVAVASG-LMEPLGALVGVGISSGFALAYP-ISMGLAAGAMIFVVSHEV |
2 | 6m2lA | 0.09 | 0.08 | 0.95 | 1.05 | SPARKS-K | | LDSHLITILSVVMTAVNFLMTFPAIYIVEKLGRK----TLLLWGCVGVLVAYLPTAIANEINRNSN---FVKILSIVATFVMIISFAVSYGPVLWIYLHEMFPSEIKDSAASLASLVNWVCAIIVVFPSDIIIKKSPSILFIVFSVMSILTFF |
3 | 5tsaA | 0.16 | 0.15 | 0.95 | 1.17 | DEthreader | | --NRVHVGYAVLGGAAGFAATALGALMALGLRA-ISARTQDAMLGFAAGMMLAASAFLILPGLDAGTISFATGDL-RIGLPLTSAIAIQDVPEGLAVALARLAVLVAVASGL-MEPLGALVGVGISSGFALPIMGLAAGAMIFVVSH-EV--A |
4 | 6ei3A | 0.08 | 0.07 | 0.86 | 1.00 | DEthreader | | -------------------YG-RNI-LVQFLITSLRAEAKHILHSFMIGVFFFPLLGGWADKSVDFNKHRAKVVFDAFYWIINFGSLAS-PDQKASTWVLQGMAAWQILPYALLTFGEVLVSATGIEFAYSAMKGVVMSFWYLTTTVGNLWVL |
5 | 4a01A | 0.09 | 0.09 | 0.97 | 1.00 | DEthreader | | AAFITAFRSGAVMGFLLAANGLLVLYIAINLFKYLFEAITGYGLGGSSMALFGRVGGGIYTKAAVGADVIDNVGD--NV--IAGMGSDLFGSYAESSCLVMYPLIVSSGSIATGLAIDAYGPDGNAGDNKDTGDPKDTSGPSLNILIKLMAVL |
6 | 6g9xA1 | 0.11 | 0.09 | 0.86 | 0.55 | DisCoVER | | LGLLGSTTCGMLLYMAFAICCLIFGLMTFPAGRLSDKGPRKVVMTGGVLLAIGFILSGF----------------IQSKYQLYITYGVAGFGGGMIYLPPADRRALATGFAVV-GL--GL-GSFLMGPLATYIWRYVFWYCGVAMGIMALIG- |
7 | 6ei3A2 | 0.08 | 0.07 | 0.86 | 1.00 | DEthreader | | -------------------YG-RNI-LVQFLITSLRAEAKHILHSFMIGVFFFPLLGGWADKSVDFNKHRAKVVFDAFYWIINFGSLAS-PDQKASTWVLQGMAAWQILPYALLTFGEVLVSATGIEFAYSAMKGVVMSFWYLTTTVGNLWVL |
8 | 4zowA | 0.07 | 0.06 | 0.88 | 0.43 | CEthreader | | IIIITGEQLSSYEYGLLQVPIFGALIAGNLLLARLVRSLIIMGGWPIMIGLLVAAAATVIS------------------SHAYLWMTAGLSIYAFGIGLANAGKGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSLM |
9 | 6cseM | 0.07 | 0.07 | 1.00 | 0.95 | EigenThreader | | GDILGGPGAIFWMWVTAFFGMATKYAEAVLAYFLEKKILGVAFAFFGAFAAFGIGNVLAIFTAAVILGGIFSSAFNGTAIMWGVKRGVFSNEAAPIAAAAAKTALVSMFLDTTITGLVLTIAGLKAVTIGLVFFAYSTVLGWSYYGEKCFEYL |
10 | 5vkvA | 0.16 | 0.16 | 0.97 | 0.46 | HHpred | | GARGRPLFNALFFILGFGAVFFLGLPLGGLLFE-HRQTLARVGGVVLVLFGLYMLGL-RP-RWGVSLRYEGETSRPLGAFLLGATLALGCLGAILTLTAVGGGVFLLAYILG-LAVPFFVVALFADGWLRRRISHYVEVLAGVVLVLVGVLLF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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