Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | VTGTARASAEGECVRCLEPVELDLDVDFQEMFSYPDSDDRGRSKAAADDEAEDDEDMIPLEDGMFDLEPLLRDAVVLALPMQPVCREDCAGLCSDCGANLNENPDHHHDAVDIRWAALQGL |
1 | 5ywrB | 0.11 | 0.05 | 0.45 | 0.72 | DisCoVER | | SYNDDVLTKDAECVICLEELLQGDTIARLP-------------------------------------------------CLCIYHKSCIDSWFEVNRSCPEHPA----------------- |
2 | 4xfrA | 0.11 | 0.09 | 0.79 | 0.67 | DEthreader | | IGIAFVAGW-------------QAEVVRLYVVCPTVRQGLAAQEPLARRAAAAPAVPV-G---SGGLAPLARVWAGG-QAAGPVVLAHG--VATGAAVLLQASG-TKAFVLRAQAI-E--- |
3 | 7k7tA2 | 0.07 | 0.07 | 1.00 | 0.64 | CEthreader | | KSLANVEYDTYKPTFTNKQVRITFGFSCKNQFGIMMYHNNRLIKSFEKVGCQVGVGVIGVIECNFYTKEYRLTINALAQKLNAYWKEKTKVPDQTWVQCDECLKWRKLPGKIMLPARWFCY |
4 | 1vouH | 0.09 | 0.07 | 0.83 | 0.60 | EigenThreader | | GVFKVKGP--------------KGELTVPYNTELTVRQDGDQLLVERPSDAQKHRALHGLTRTLV------ANAVKGVSDGYTINLELFRAKLTGKALEMNIIIEPPADAYHLKAGKAGAT |
5 | 5a4gA1 | 0.23 | 0.07 | 0.33 | 0.23 | HHpred | | --------------------------------------------------------------------------LYWRDPMVPGQRFDKPGKSPYMDMPLIPVYEEEAVRIDGR------- |
6 | 5mtwC | 0.20 | 0.11 | 0.54 | 0.75 | MRFsearch | | --VRISCHLRIQNQA--TQDVATADFEFAALFDYHLEDDP----------TEEELTAYAATTGRFALYPYIREYVYDLT------------------------------------------ |
7 | 5ixmB | 0.12 | 0.09 | 0.73 | 0.28 | FFAS-3D | | IIGSSESQETVSIFRNGVAAENQLVLHVQAQVLIPGHDIYPLQVNVFRTFFDNPLTALAKEAEAEVLRQEMREQAAQQL--------------------------------VRQLLTVHA- |
8 | 2z5bB | 0.08 | 0.07 | 0.92 | 0.86 | SPARKS-K | | LYVQATHLLQIRLNG---------EMDSTYEVSSKGLYDDEEEEFVRDHLSDYQVVTKLGDSADPKVPVVCVQIAELYRRVILPEQFSLLISMSSKIWSADDNDFGKLVFVLKCIKDMYA- |
9 | 4nhrA | 0.09 | 0.05 | 0.54 | 0.64 | CNFpred | | AEYQMIMTVNATVLIP-GRDIYPISAKVFRSFFDNPQMA---------LAKDNEQDMI-----VKEMYDRAAEQLIRKLP----------------------------------------- |
10 | 5j44A | 0.05 | 0.04 | 0.76 | 0.83 | DEthreader | | ---------T-------TLDLQKADINVPVNTVS----------IFG-GRGAPGDLYYDSSTKQKDRNKAIDTVKQQKISGKDVLALDGVILI--KLDFMQGDIVTLLTVSLLVDVKNLED |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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