>PF02601 (314 residues) LFAEAHKRPLPALPRRIGVITSPTGAAIRDILSVLGRRFPAVPVLVYPVAVQGAEAAPEI VAALERANRRAECDVLILARGGGSLEDLWAFNDERVARAIHASRIPVVSAVGHEIDFTIA DFVADRRAPTPSAAAELVVPDRRAWLDRLRGLEARLHQRLRDHLHRSTERLAALEARLQR QHPGRRIRQHLQRLDELAARLQRAMRLALHRRRQRLETLEARLHRFSPLPRLQHERQRVE ALRHRLHQALRQRLQQARQRCSTLARQLHTVSPLATLDRGYAIVTDAQGHVLQCATEVAP GTRVTARLARGRLH |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LFAEAHKRPLPALPRRIGVITSPTGAAIRDILSVLGRRFPAVPVLVYPVAVQGAEAAPEIVAALERANRRAECDVLILARGGGSLEDLWAFNDERVARAIHASRIPVVSAVGHEIDFTIADFVADRRAPTPSAAAELVVPDRRAWLDRLRGLEARLHQRLRDHLHRSTERLAALEARLQRQHPGRRIRQHLQRLDELAARLQRAMRLALHRRRQRLETLEARLHRFSPLPRLQHERQRVEALRHRLHQALRQRLQQARQRCSTLARQLHTVSPLATLDRGYAIVTDAQGHVLQCATEVAPGTRVTARLARGRLH | |||||||||||||||||||
1 | 5ellA | 0.11 | 0.04 | 0.38 | 0.57 | DisCoVER | ------------MK-TIGLLGGMSWESTIPYYRLINEGIKSAQVLLHSVDFEWDKTGDILAEAALGLQRAG-AEGIVLC-T------NTMHKVADA--IESRCTLPFLHIADATYTMEFYRGRLTFGFDTAAIHAEDAVFML---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
2 | 7bspA | 0.06 | 0.04 | 0.66 | 0.83 | DEthreader | DLMNYGNTDLNEGQVDYVFTDKT-TLTLQQAAETIEALHAAGLKVWVLTGDKGRMAPLQKAQIVRMVKNLGSPITLSIGD-------G---AN--DVSMIL-ESHVGIGIK--GKEGRQAARNSDYSVPKFKHLKKLLLAHHLYYVRIAHLVQYFFYKNLCFILPQFLYQF--FCGF-----------------------------------------------PRLYMKISGNAMLQLGPFLYWTFLAAFEGTVFFFGTYFLFQTASVYGN------------------------------------------ | |||||||||||||
3 | 3lp6A | 0.21 | 0.10 | 0.47 | 0.48 | CEthreader | ------------ERPRVGVIMGSDSPVMADAAAALAEF--DIPAEVRVVSAHRT---PEAMFSYARGAAARGLEVIIAGAGGAA----------HLPGMVAAATLPVIGVPVPLDSLLSIVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLAG------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
4 | 3uowA | 0.10 | 0.08 | 0.76 | 0.63 | EigenThreader | -------------YDKILVLNF-GSQYFHLIVKRLNNIKIFSETKDYGVELKDIK----------------DMNIKGVISGGPYSVTEEVFEYFLEK------KIPIFGIC---YGMQEIAVQMYNHPEVYLMFYNFAYNIPIRYHELELKNIEKYKAENVYTFLKSTFPENFLSNLQGVTDPEQKRKIIGKLFIEEFEKAVNN----------------------IDIDPDIIESKDDVKTLSREEITNRHKLNILREVDDIFINDLKQYGL---YNQISQAAVLY---DYVC---------VLRAVKTTANW | |||||||||||||
5 | 4ja0A2 | 0.16 | 0.07 | 0.45 | 0.55 | HHpred | -----------TIHHKVVVFMGSPADHCQKIAKAARELGLDVDLRVTSA----HKATEETLRIMQQYEDT-HGALVFIAVAGRSN-GLGPV-----L--SGNTSYPVIN-CPPPSDKLVQDIWSSLSVPSPDSAALMAAQQDYLVWGRLRSKQLDMAHSLRQADKK---------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 6gmhQ | 0.13 | 0.09 | 0.68 | 0.77 | MRFsearch | ----------------IGAVLAHYFREARDVFAQVREATADISDVWL----QYISAVQMYENCLRKFYKHQNTEVVL-----------------YLARALFKCG-KLQECK------------------QTLLKARHVAPSDTVLMFNVALVLQRLATSVKSNLKEVLNAVKELELAHRYFSYLSKLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMF------------------------------------------- | |||||||||||||
7 | 4iloA | 0.11 | 0.07 | 0.66 | 0.80 | FFAS-3D | ------------------------SNAMHDALQSILA-------------------IQELDIKMIRLMRV--------------KKEH----QNELAKI--------------------------------QALKTDIRRKVEEKEQEMEKLKDQIKG-GEKRIQEISDQINKLENQQAAVKKMDEFNALTQEMTAANKERRT-LEHQLSDLMDKQAGSEDLLISL--KESLSSTENSSSAIEEEIRENIRK-INEEGRSLLSQRTQLKETTDPELFSKDRVVVPIENRVCSQHENLVRKQDHLVF-------- | |||||||||||||
8 | 6w2rA | 0.11 | 0.07 | 0.64 | 0.68 | SPARKS-K | --------------GTTEDERRELEKVARKAIEAAREGNT-------------DEVREQLQRALEIARESTK-----------TAVKLALDVALRVAQEAAKRG---------NK-----------------DAIDEAAEVVVRIAEESNN-----SDALEQALRVLEEIAKAVLKSEKTKKAVKLVQEAYKAAQRAIEAAKRTVIKLAIKLAKLAARAALEVIKRPKSEEVNEALKKIVKAIQEAVESLREAEEKARERVREAVERAEEV------------------------------------------- | |||||||||||||
9 | 2j68A | 0.13 | 0.10 | 0.81 | 0.73 | CNFpred | ---------------GIEIVDSPG-LNDTEARNELSLGYNNCHAILFVMRA--QPCTLGERRYLENYIKGRGLTVFFLVNAW-DVEELQASERQVFNANLAE-RVFELSSIQAL-MDSLNTFLTRE---RAIAELRQVRTLARLACNHTREAVARRIPLLEQDVNELKKRIDSVEPEFNKLTRDEFQKEIINTRDTQARTISESFRSYVLNLGNTFENDFLRYQP-LQKAFEQYITDKSAAWTLTAEKDINAAFKELSRSASQYGASYNQIQITEKLT------------------------------------ | |||||||||||||
10 | 6n51B | 0.05 | 0.03 | 0.59 | 0.67 | DEthreader | ---------VRYNWTYVSAVHTEGNYGESGMEAFKDMSKEGICIHSYKIYSNA-G-EQSFDKLLKKLTSHLKARVVACFCE---G-MTVRGLLMAMRRLGLAGEFLLLGSDGWADRYVTYQRAVGGITIKLYEI-GS---L-------P--KG--VF-PTDDLTG-DL-IPV-QY--LRWGFCLIAYLQGIGLSPAMSYSALVTKTNRIARIAGSKKKICTK-------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |