Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MGSRPCALGLFCCCSSCFCLCCPRHRPVSRLAAAVGGAAAVPAVVSGVTGLILSPSQSPIFIQPTPSPPMSPLRPGLDLVFANPPDHSAPLGVTRPSAPPLPHVVDLPQLGPRR |
1 | 1lcyA1 | 0.06 | 0.05 | 0.86 | 0.64 | DisCoVER | | ----VVEKTAPAVV--YIENGSGFTNHVVRVR-LLSEPLPTLPLGVVAMGSPFALQ--NTITSGIVIQTDAAIDFGNAGGP----LVNLDGEVIGVNTMKISFAIPSDRLR--- |
2 | 5mpbZ | 0.09 | 0.08 | 0.84 | 0.83 | DEthreader | | LSQNELTDAIALAVRLG--E-E--DMIR-SVFDATSYILAAQKTSFEYEGQDINGKSEHELTGPVHAFAGSKND----VGTCNLMGQELAQGLLH--VSPSFLVLLNH------ |
3 | 3sobB | 0.09 | 0.09 | 1.00 | 0.64 | CEthreader | | CDWLGEKLYWTDSETNRIEVSNLDGSLPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPH |
4 | 1fdiA1 | 0.06 | 0.06 | 1.00 | 0.53 | EigenThreader | | RGTGNETNYVMQKFARAVMGALPDTYPGYWQIISEIATRMWDELRHLCPDFYGATELGFIQWPCRHYSCRSMTGNCAALAALADEPGQWWIGACNELVTENLSPITKTPEYKYC |
5 | 6g1yA3 | 0.21 | 0.07 | 0.34 | 0.23 | HHpred | | --------------------------ATHALSQAIPEAEIYAGTAAGMLAIPLSQVKSDLFFRKA------------------------------------------------- |
6 | 7bvfA | 0.20 | 0.18 | 0.93 | 0.67 | MRFsearch | | --SMFLTLSILTGLLAAWYHFRMDNRRNRILASTPLLVVAVIMVAGEVDDVLAEPDPNAGMLQPVPGQAFGPKPEGVGEDLKSDPVVSKPGLVNSDASPNKPNAAITD------ |
7 | 7aavK | 0.16 | 0.12 | 0.76 | 0.42 | FFAS-3D | | -----------------------KVRELKRIKEDREALEKEKAEIERMRNLTKAVKGKYKFLQKYYHRGAFFMDEDEEVY---KRDFSAPTLEDHFNKTILPKVMQVKNFGRS- |
8 | 6ahfC1 | 0.09 | 0.09 | 1.00 | 0.88 | SPARKS-K | | QFTERALTILTLAQKLASDHQHPQLQPIHILAAFIETPEDGSVPYLQNLIEKGRYDYDLFKLVRIPQQQPAPAEITPKIQKQQKDSFIAQFALNDSSIQQIFKEAQVDIEAIKQ |
9 | 2rd0A | 0.12 | 0.04 | 0.37 | 0.64 | CNFpred | | -----TVSQRFGLLLESYCRACGM--YLKHLNRQVEAMEKLINLTDILK----------------------------------------------------------------- |
10 | 6w1kA | 0.06 | 0.04 | 0.79 | 0.83 | DEthreader | | RDHICYDHPPRIF-Y-NHTTISTLISINKNLN--S-EGGILKVS--PDGLLQQSSTYIEFAERLVLP-Q-------FK-DL-----P--N-DEVNEHRRDGFENADKESDQLTR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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