Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | QQQQVKQPCQPPPQNPCVSPIKEPCHTKLPEPCHPQVPEPCHPQAPEPCHPTVPEPCQPQMPEPCHPKAPEPSQSQVPEPCHPKVPEPCQPQVPEPCHPKVPEPCQPQVLEPCQSKMPEPCQP |
1 | 2hm5A | 0.23 | 0.05 | 0.21 | 1.12 | MRFsearch | | ---------------------------------------------------QITGTCPSGCSGDCYPECPPGCCGQV---------------------------------------------- |
2 | 2nbiA2 | 0.22 | 0.18 | 0.83 | 2.22 | SPARKS-K | | QPSSQPTGPQPSSQPSECADVLELC---PYDTCF---LPFDDSSRPPDCDPSVNRPDCDKLSTAIDFTCPTCC----PTQCRPDNPM----FSPSPDGSP-PVCSPTMMPS------PLPSPT |
3 | 2hm6A | 0.26 | 0.07 | 0.25 | 1.12 | CNFpred | | -----------------GSQITGTCPSVCSGDCYPECPPGCCGQVNLN--------------------------------------------------------------------------- |
4 | 3zxaC2 | 0.07 | 0.06 | 0.76 | 0.74 | DisCoVER | | AQIGDFAGVKDGPRLVSWSKTWEHDCHFLGTGNFSLTLFYEKA----PVSGLENADASFSVAAAGSVQWAGVKVAE---RGQGVKMVTTEEQPK-GKWQALR--------------------- |
5 | 2z8sA | 0.02 | 0.02 | 1.00 | 0.46 | CEthreader | | KTADGTKDGTGKVIGNANADYRNEQGRVLSGPEYLTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEA |
6 | 6fkfb | 0.04 | 0.04 | 1.00 | 0.55 | EigenThreader | | VLGVLIFFGKGVLSDLLDNRKQRILNTIRNSEELRGKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTLEQFENYKNETIQFEQQKAINQVRQRVFQQALQGALGTLNSC |
7 | 6kxsJ | 0.21 | 0.10 | 0.46 | 0.14 | HHpred | | -------------------NISDPTSP-LRTRFVYHLSETCYTYDRNKCYTAVVPLV-----YGGETKMVE--TALTPDACYP---------------------------------------- |
8 | 2hm4A | 0.23 | 0.05 | 0.21 | 1.12 | MRFsearch | | ---------------------------------------------------QITGTCPSGCSGDCYPECPPGCCGQV---------------------------------------------- |
9 | 6kxsJ | 0.16 | 0.13 | 0.84 | 0.45 | FFAS-3D | | RIVLVDNKCK-------CARITSRIIRSSEDPNEDIVERNIRIIVPLNNRENISDP-------------TSPLRTRFVYHLSDLCKETCYTYDRNKCYTAVPLVYGGETKMVETALTPDACYP |
10 | 4nl6A | 0.10 | 0.10 | 1.00 | 1.64 | SPARKS-K | | QQWKVGDKCSAIWSEDGCSIDFKRETCVVVNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPPPPPPPPPPPHLLS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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