Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | MKRPNNRPTNTMSLILCLTLSSLCVSSQSASVHGKNFATNRAVKSSSPFVVLSPDDNVVSMSGENGYRSALREAFDKSSRDYDDNGEDVFSNEKRRLRFHKRRLRFDRRDQDEGNFRRFPTNAVSMSADENSPFDLSNEDGAVYQRDLRAPRLRFYSLRKRAAGGMEQSEGQNPETESHSRRKRSVLTPSLSSLGESLESGISKRISINQDLKAITDMLLTEQIRERQRYLADLRQRLLEKGKRSSGVSLLTSNKDEEQREL |
1 | 5ucgA | 0.06 | 0.05 | 0.71 | 0.65 | DisCoVER | | --GVSEVM-GYSHVAFGSTKS--YR--VSTGAAHAAKGGGDSYSMARKYAAAI------SDGMGNGAHFESNETI-----LLILESGIDE-----KIAI---KTINSILSLRTTDEIYSTLDLSIIDLASCKFLKVGSTLPIGVEVVSEQLLIMMSDG---IFEGPKHVENHDWMKRKMKGLTNDPQEIADLLMEEVIRGQIEDDMTVV-VVR-ID--HN------------------------------------------ |
2 | 2wdeA | 0.05 | 0.04 | 0.73 | 0.67 | DEthreader | | -----------------SD-LHGQ--AFPHYFMEPPNLIYLTILVPLAYLLS--------GLI-ALVLDGGHMVSH--WEWTLGRVELLLFRG-F-----SYPYVKVSFALENQLDSGHTHDLTPRP-----------------------GSAAGKALMPV-A-HLPKA---EAFLKQLHQHLFTPLAVSL--WDQLVGEAS--TTILPQAITWDHLYAYTGFTYPELY--VLDIASNV-TDFYQQGGDVSRVLDPDAPTER |
3 | 6mjpG | 0.09 | 0.09 | 1.00 | 0.43 | CEthreader | | PRDVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIVTLLGEWGAPQAQKMARDMRAFATSGGAIVRTGVWARDANDFIFIAKVENEHLYGLNLWRFDENKKLSTVIFSEQVLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPDKLAVVTVKPEELSLTGLSDYVHYLKASEQDSSRYELALWRKVT-QPISIAVMMLMALSFIFGPLRSVTMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPL |
4 | 1mivA | 0.08 | 0.08 | 0.96 | 0.60 | EigenThreader | | ------KPPFQEALGIIQQLKQH-GYDAYFVGGRPIGDVDIATSALPHGTVVVG--KYEVTTFKSVFVRSLEEDLKRRDFTNAIDPFGTVGEAEKRFREDVSELGFPDTEQAIVQNAERTEEKLLGGPFAARALPLLAETGLNLRLAAAYRWPWLAAREERWALLCHALGVQESRPFLRAWKLPNKVVDEAGAILTALADIERALSVETVRAAFTGHEKLRRRFAKDVIEVKEALDAIWRAVVNGEVEN--EKERIYAWLER |
5 | 6chgB | 0.20 | 0.15 | 0.74 | 0.36 | HHpred | | --------------------KLKYCGTDFDKSSINL--MDR-----SDKLAFSLDDHSVSVSENCGWRSVRSDVCMKTPVGCDFYGYRDKGLQV----IHEGRLTLKPHAGDRIGFLLTYSLKRIQENKECEPTNVVRDKNQLFKYELENSSFEVFVNGVSHGIAFEGLTPQYNEKFYLHHEIRNGYYATLSSFQ-------GGTASIIVDIKTLNDIY-NEQIAS--DIVWDLID-------------------------- |
6 | 3ghgK | 0.18 | 0.07 | 0.39 | 0.35 | MRFsearch | | ------RPIRNSVDELNNNVEAVSQTSSSS----------------------------------FQYMYLLKDLWQKR---------------QKQVKDNENVVN---------------------------------------------------------------------------------------EYSSELEKH-------QLYIDETVNSNIPTNLRVLRSILENLRSKIIRKGGETSEMYLI----------- |
7 | 5lqxG | 0.12 | 0.11 | 0.87 | 0.45 | FFAS-3D | | ----SIKNIEKITNTMKVVASTRMGRAQRAMASSRAFTSTPETAEKTLIIAVSSDKGLCG-----SIHSQIAKATRAKLQETPNAD-VVTIGDKIKAQMLRTHLSFNGVGKEAPTFWEASLIADEIRKLGDYDKIYNKFVSGVAF---EPSVFPSFSPISIEESPKLSEFELEEDQAIPTSLSQISLTNAINAMAEGYASEISARRAMDNASKNAGEMINKYSILYNRTRQAVITNELVDI--------------------- |
8 | 5yfpE | 0.08 | 0.08 | 1.00 | 0.72 | SPARKS-K | | EEKATHVIQLFIQRVFAQKIEPRFEVLLRNSLSISNLAYVRILHGLFTLFLIDYFQLLEIDDSNQILSTTLEQCFADLFSHYLYDRSKYFGIEKRSLEAILVDMTSKFTVNYDKEINKRVLLDKYKEKLSTNTASDIDNSPNSPANYSLNDVDSMLKCVVESTARVMELIPNKAHLYILEILKIMFLGIVDSYMEIALEVAYWKICKVDGVVNLNFLKFISMSTEILDLLSISIKSIFLPLLNNSPEIKAQIIEMTNSQIQK |
9 | 5jtgA | 0.13 | 0.06 | 0.44 | 0.37 | CNFpred | | -----------ADYLLYSLIDALVDDYFVLLEKIDD------------------------------EIDVLEEEVLER-----------EKETVQRTHQLKRNLV-------------------------------------ELRKTIWPLREVLSSLYRDVPPLIEK--------------------------------------ETVPYFRKVYDHTIADTVETFRDIVSGLLDVYLSSV-------------------- |
10 | 1h0hA | 0.06 | 0.05 | 0.81 | 0.83 | DEthreader | | TLIHRTSYTIMYAMG--VIR--S---------N--RQGSDHGPGYSYIKSM--------WPDAAYYLPK-----KGFFAMVNGSFWRVFFLPCIPDGDLIVELAKVQKLLAKTPATKLKTDYWPHKIA----LINGTFLQTSTGSAWAWRRIIYNRA-----V--DLNGEWNAEKKWV---GDVPDGPWPP-QA--DKEKGKRAIMKPYAYLYGGRDGPLPE-YYEP-MECPVIEAVCDPR-PLQQVH-MV-GIPWHYGGDI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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