>PF02194 (184 residues) SAKVSAALNQVLSYIIRDFVNSWYLSISKNPAFSNEVDKALRHALLGIKDRLTSLDLAET LTTRLVPILTAHFRDFSDAERSVRGKKLNRSVTESEELDLAIASKYRDGKLHPAATLSFS DTKTAQQDYLRKMVFKILPKVLPENLLASRAVATIIREIVACAVLFPVMQMLSDPDTWNQ LMEN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | SAKVSAALNQVLSYIIRDFVNSWYLSISKNPAFSNEVDKALRHALLGIKDRLTSLDLAETLTTRLVPILTAHFRDFSDAERSVRGKKLNRSVTESEELDLAIASKYRDGKLHPAATLSFSDTKTAQQDYLRKMVFKILPKVLPENLLASRAVATIIREIVACAVLFPVMQMLSDPDTWNQLMEN | |||||||||||||||||||
1 | 2j69A | 0.04 | 0.04 | 0.85 | 0.61 | DisCoVER | ESFRSYVLNLENDFLQPEL--NLF--DFLSSGKREAF--NAALQKAFEQYITSAAWTLTAEKDINAAFKELSRSASQYGASYNDQITEKLTGKDVEED-NSPGWAKW-A-MGLLGF--------------DWKNILITAVTGLGPIGLGVGFLQADQARR-ELVKTAKKEL--VKHLPQVAHS- | |||||||||||||
2 | 6wmpD | 0.09 | 0.08 | 0.88 | 0.83 | DEthreader | GKRYTRRLVDVAQD-LVVPCGLCAKCGQVNVG-ESVGVIAAQSIGEP-GTQLTMGLPRVAEL-EARRPKDAA--ILS--D-RLGQRIEIIDKHIE-EQVSRGDVLA--DGPTDPHDLLKYKGLEEFADYILIEAQSVYRMQGVV--I-----NDKHIETI-VRQMLRVLMGITRSSL--AFQET | |||||||||||||
3 | 3s84A | 0.08 | 0.08 | 0.99 | 0.49 | CEthreader | ADQLRTQVNTQAEQLRRQLTPYAQRMERVLRENADSLQASLRPHADELKAKIDQ-NVEELKGRLTPYADEFKVKIDQTVEELRRSLAPYAQDTQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQRLAPLAEDVRGNLRGNTEGLQKSLAELGGHLDQQVEEFRRRVEPYGENFNKALVQQ | |||||||||||||
4 | 3szrA2 | 0.08 | 0.07 | 0.78 | 0.55 | EigenThreader | -----------------------EDENEKMFFLIDKVNAFNQDITALMQGEETVIRLFTRLRHEFHKWSTIIENNFQEGHKILSRKIQLPGFVNYRTFETIVKQQIK---ALEEP----------AVDMLHTVTDMVRLAFTDVSIKNFFNLHRTIRAEQEREGEKLIRLHFQMEQIV-----Y | |||||||||||||
5 | 1vt4I | 0.11 | 0.11 | 0.95 | 0.31 | HHpred | QYQYKDILSVFEDAFVDNFVQDMPKSILSKEEIDHIILRLFWTLVQKFVEEVLRINYKFLM-SPI-KTEQRMTRMYIEQRDRLYNDNQVKYNVSRQPY-LKLRQALLELALDVCLSYKNCNSPETVLEMLQKLLYQIDPNWTSRSD-HSSNIKLRIHSIQAE--LRRLLKS--KPY-ENCLLV- | |||||||||||||
6 | 4c0oA | 0.13 | 0.12 | 0.92 | 0.40 | MRFsearch | --EAAVGLLKGTALVLARL---------PLDKITECLSELCSVQVMALKKLLSQVHPCQKVIQEIWPVLSETCRCLRFAVRCVGKG----SAALLQPLVTQMVNVYHVHQHSCFLYLGSEGCRQGLLDMLQALCIPTFQLLEQQNGLQNHDLFRLATRFIQRQVVIPILQWASVMRFLRDLIHT | |||||||||||||
7 | 5uot02 | 0.08 | 0.07 | 0.90 | 0.80 | FFAS-3D | -EEVEKYEKQTFEIIVHQYIQQLVEPA---LSMLQKAMEIIQQAFINVAKKHFGEFLNQTVQSTIEDIKVKHTAKAENMIQLQFRMEQMVFCQDQIYSVVLKKVREEIFNSFTEIGI-------HLNAYFLETSKRLANQI-------PFIIQYFMLRENGDSLQKAMMQILQEKNRYSWLLQE | |||||||||||||
8 | 6w2rA | 0.10 | 0.10 | 0.97 | 0.74 | SPARKS-K | RRELEKVARKAIEAAREEQLQRALEIASGTKTAVKLALDVALRVAQEAAKR-GNKDAIDEAAEVVVRIAEEALRVLEEIAKAVLKSEK----TEDAKKAVKLVQEAYKQRAIEAAKTGTPDVIKLAIKLAKLAARAALEVIKRPKSEEVEALKKIVKAIQEAVESLREAEESGDRERVREAVER | |||||||||||||
9 | 4gmxC | 0.06 | 0.06 | 0.97 | 0.69 | CNFpred | VAERNRLLSDLMQLPNMAWDTIVEQST-LDSETVKIIANIIKTNVAVCTSMGADYPQLGHIYYNMLQLYRAVSSMISAQVAAEGLIATKTP---KVRGLRTIKKEIL--KLVETYISKARNLDDVVKVLVEPLLNAVLEDYMNVPDARDAEVLNCMTTVVEKVMIPQGVILILQFECTLDMINK | |||||||||||||
10 | 4a01A | 0.06 | 0.04 | 0.78 | 0.83 | DEthreader | ALMGFLLAANGLLAESSCAALVVASISSGHELAMLYPLIVSSVGILVCLLTTLFAFFEI-VKEIEPYSNAYSVQDVADSCR-TG---------AA-TNVI-FGL-A---------L-GYKSV-IIPIFAIAI-S--------------FAAYGIAVAALGMLIGFAIGAISASNTGGAWDNKKD | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |