>PF02158 (363 residues) TKKQRKKMHNHLRQNMCPDHQNRNLANGPNHPGPGPGPEEIPMVDYISKNVPATDRVIRH EAETSFSGSHPSSTSHHSSTATNTSSHRHEDRTWSLDRTESVISDSHSGMMSSSVGTSKC NSPACIEARARRAAHCGITDPRRPMMQYRDSIDSLRDSPHSDRYVSALTTPARLSPVDFH YSLPTQVPTFEITSPNSSHAVSLPPAAPAAYRVEDDLPLLRRYQVPLQDIQRHEAYRQQR CSYLNDSTGSLPSSPFRLVEDDEYETTQEYLSALEQPKRTVSNSRRWRKSKLNGHISQRG EAMRDYSSRSCVSDSDSEEEQASESTPFLSMQNMNMVVNTEPSTIYRPADSRTYYSSGRH NTR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | TKKQRKKMHNHLRQNMCPDHQNRNLANGPNHPGPGPGPEEIPMVDYISKNVPATDRVIRHEAETSFSGSHPSSTSHHSSTATNTSSHRHEDRTWSLDRTESVISDSHSGMMSSSVGTSKCNSPACIEARARRAAHCGITDPRRPMMQYRDSIDSLRDSPHSDRYVSALTTPARLSPVDFHYSLPTQVPTFEITSPNSSHAVSLPPAAPAAYRVEDDLPLLRRYQVPLQDIQRHEAYRQQRCSYLNDSTGSLPSSPFRLVEDDEYETTQEYLSALEQPKRTVSNSRRWRKSKLNGHISQRGEAMRDYSSRSCVSDSDSEEEQASESTPFLSMQNMNMVVNTEPSTIYRPADSRTYYSSGRHNTR | |||||||||||||||||||
1 | 5nqaA1 | 0.04 | 0.03 | 0.74 | 0.62 | DisCoVER | PLYKKPPADALGEWGKASKLQQELIRYAINIYLSDRISLHRHIKRMECKSQ-------------KFNYRTL----PTT--S-----------VIIAFYNIVLETSPAVLLKEIILVDDLIDR--VR--LI--RTNKREGL-VRARLIGAFAGVLTFLDCHCECNWLEPLAVVCPVIDTI-------------------------DWNTFEF-Y-MQIGEPMIGGFDWR-LTFQWHSVPKQERDRR----SRIDPIRSPTMAGGLFAVSKYLGT---YDTGMEVWGGENLELS---FRVWQCG-------------------GKLEIHPCSHVGHVFPFLQNTARAAEKHFYNRNPPAREAYG- | |||||||||||||
2 | 2amvA | 0.07 | 0.05 | 0.71 | 0.67 | DEthreader | -TFAHRDRTLQNTMVEMEELEIEEDAGLGN-----------GRLAACLDATLGL-AAYGY-ARPYDTPVPG--VVNTMRLWSA--AENISRVLYPLRLQEFVV-----------------------DKVAIQL--HPSLAIPELMTVKTCAYTNHTVLPEAL--------------GVARI-----------KTNGIT-PRRWL------------VLCNPGLAEI--IA-ERIGEE-YI--S--D----L------LLVVALFDVQKRQLNCLHTLRIKPKFVVPRTVMIGGKAIIKLIT-AIG---DVVNHVGDRLRIKVIPAADLSEQISTAGTEASTMDGANIFCVMVNIATSKF---- | |||||||||||||
3 | 3etdA | 0.07 | 0.07 | 0.99 | 0.62 | CEthreader | DRGASIVEDKLVEDLKTRETEEQKRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHCKGGIRYSTDVSPFGGAKAGVKINPTRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIEASYMSILGMTPGFGDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASEKQLTKSNAPRVKA--KIIAEGANGPTTPEADKIFLERNIMVTVSYFEWLKNLNHVSYGRLTFKYERDSNYHLLMSVQESLERKFGKHGGTIPIV | |||||||||||||
4 | 5dizA | 0.04 | 0.04 | 0.93 | 0.62 | EigenThreader | --------NPETNLLFNLNSCSKSKDLSAALALYDAAITSSEVRL-------SQQHFQTLLYLCSASITDISLQYLAIDRGFEIFDRMVSSGISPNEASVTSVARLAAAK--------GNGDYAFKVVKEFVSVGGVSIPRLRTYAPALLCFCEKLEAEKGYEVALEEAEISALLKVSAATGREKAGEVGDDVGGWHGHGWVGEGKWGNVSSTGRCLSCSEQLACVDTNEVETQKFVDSLVALAMDRVVFSEFQDWLEKHGDY--EAIVDGANIGLYQQGSFSLSQLESVMKWPLILLHKRRVKTLLENPTHRNLVEEWISNGVNDDWYWLYAAAKLKCNDEMRDHIFELLGSTFFQKWKERH | |||||||||||||
5 | 1iznB | 0.19 | 0.09 | 0.48 | 0.34 | HHpred | --------------------------------RL--PPQQIEKNSDL-ID---------------------------------------------------LVPSLC-EDLLSSV-----DQPLKIA-------RD-KVVGKDYLCDYNRDGDSYR-SPWSNKYDPPLED-------G-----------------------AMPSAR------------LRKLEVEANN--AFDQYRDL--YFEGGVS-----SVYLW-DLD-----HGFAGVI-LIKKAGKIKGCWDSIKLTSTVMLWLQTTGSGTNLGGSLTRQMEKDTVSDSSPH--IANIGR--------------------------- | |||||||||||||
6 | 2xrhA | 0.19 | 0.02 | 0.12 | 0.40 | MRFsearch | --DKRKAFHKQLHEYATKNTDK----------------------------------------------------------------------------------------------------MTVADFEARQKAV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KEALKKGNME--------------------------------------- | |||||||||||||
7 | 5o9zE | 0.15 | 0.06 | 0.43 | 0.47 | FFAS-3D | TKKEQKKLRRQTRREAQKELQEK-VRLG----LMPPPEPKVRISNLMRQDPTKVEAHVRAQMAKR-------QKAHEEANAARKLTAEQRKVK----KIKKLKEDISQGVHISVYRVRNLSNPA---KKFKIEANAGQLYLTGVVVLHKDVNVVVEGGPKAQKKFKRLML-HRIK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 6f1tg | 0.08 | 0.08 | 0.96 | 1.24 | SPARKS-K | TEEEKQQILHEFLSFFDSEQINIKLSLNRQFFDERWSKHVVSCLDWQYPELLVASYNNNEDAHEPDGVALVWNMKYKKTTPEYVFHCQSASATFAKFHPNLVVGGTYSGIVLWDNRSNKRTP------------VQRTPLSAAAHTHPVYCVNVVTDGKICSWSLDMLSHPQDSMELVHKQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGHAAVGAVDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNAGYV-YDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEG-QIVIYDVGEQIAVPRNDEW | |||||||||||||
9 | 6edoA | 0.07 | 0.05 | 0.76 | 0.83 | DEthreader | -GTYTWQPGVLTQ-VFVLSVLLPLLEKRQLV--IPSRGETIYAK-SF-QMFATSKL--ESSMLGST-----RFRW-------GAETLEPIGQLESFR---------HTDLQEGTYVTENGILDEIADVLRLNSVLELSRTLTSLT-F-A-----GKKEQSLPRSFIFSVVYV-EALKNLDTWLADYLVMKVSLLVRDQAGAKIKEMAVSDTDTMDLID-SRKASFLLQKVVARKLLAEFSASPAGG----KA-EEG--------------------------DTLANGGGGGGGGGGGGGG------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GG-----GGGGGGGGGGGG | |||||||||||||
10 | 1zlgA | 0.09 | 0.09 | 0.97 | 0.86 | MUSTER | QSGQ------EVK---SSKFNISIEPVI-RRWNYGIHPSEDDATHWQTVAQTTDERVQVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTPEEPDIPVHHFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEQPDCDAITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKKTEDPTVNRFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNIMAKANLYQPMTEVTTESRQNSLPNSIISQSQILPSDH | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |