>PF02155 (376 residues) VMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRRLLVDFPKGSVSNAQQPDLSKAVSLS MGLYMGETETKVMGNDLGFPQQGQISLSSGETDLKLLEESIANLNRSTSVPENPKSSAST AVSAAPTEKEFPKTHSDISSEQQHLKGQTGTNGGNVKLYTTDQSTFDILQDLEFSSGSPG KETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGNSNEDCKPLILPDTKPKIKDNGDLVL SSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTVYCQAGFPGANIIGNKMSAISVHGVS TSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVGSENWNRCQGSGDDNLTSLGTLNFPG RTVFSNGYSSPSMRPD |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | VMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRRLLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLKLLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDISSEQQHLKGQTGTNGGNVKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGNSNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTVYCQAGFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVGSENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPD | |||||||||||||||||||
1 | 4ruwA | 0.05 | 0.05 | 0.82 | 0.87 | DisCoVER | ------RRDLRVTWNIHTAVAVVDEPRIAAVIREAPDVVVLNEVHRDAPG--PG-SHGDQPARLAELLADGYVHTWFGLTE---VDLPHEGVLPGSS-NGNVVSRHPFVGGGVVVPLPNKLRRSLLTVTVDVDVVVHATHLSTPARVPSVLAGDLNWTTDVYSQNNLQSWIAEDH--LA-----------DTWRQVNDPGAGPTTASYHPDRRI-DYVFATPAFDVVAGHVSLVDHLGVVDLRLGPAARTVLAGEDGLDGWAQLLSVCKNRGQADDTAVRAVLRNRAGVALRTVTDSGTSRDRCTVETWRGALPPG-----ARLEACLVG--------A---------------------DGTILASRTET----- | |||||||||||||
2 | 5efvA | 0.06 | 0.05 | 0.84 | 0.62 | CEthreader | QSFWVDPRTKIIYMTQARPGNHYMLSRLKPNGQFIDRLLVKNGGHGTHNAYRYIDGELWIYSAVLDSNKNNKFVRFQYRTGEITYGNEMQDVMPNIFNDRY-------------------------------------------TSAIYNPVENLMIFRREYKPTERQLKNSLNFVEVRSADDIDKIDKVLYQMDIPMEYTSDTQPMQGITYD---AGILYWY-----------TGDSNTANPNYLQGFDIKTKELLFKRRIDIG-----GVNFQEAEGLDMYYDLETGRKALLIGVTIGPGNNRHHSIYSIGQRGVNQFLKNIAPQVSMTDSGGRVKPLPIQNPAYLSDITEVGHYYIYTQDTQNALDFPLPKAF | |||||||||||||
3 | 6tnfA3 | 0.09 | 0.08 | 0.89 | 0.65 | EigenThreader | IKAIENST---SVSDHKVKNRKQTEKVLRSKIRLGCMPEQLMQNAFQNHSMVIKDILSLAQTFLHSAHPAVVSFGSCMYKQAFAVFDSY---CQQEVVCAL---VTHVCSGNETELDISLDVLTDLVILHPSLLLRYATFVKTILDSMQKLNPCQIRKLFYILSTLAF-----SQRQEGSYIQDDMHMVIRKWLSSSVPNHKQMGIIGAVTMMGSVALIECDGQLSTLLDLVGFCCEQTLQLLDKFGKSLVEDFPNDFVV---DLSPTVDGSFLFPVKSLYNLDEDETQGAIAI--------------NLLPLV------SQKRV---VSPICLSPCFRLLRLYTGEQNNGSLEEIDALLGCPLYLTDLEVEGKLD | |||||||||||||
4 | 2z8wA2 | 0.22 | 0.08 | 0.35 | 0.30 | HHpred | -----------------------------------------------------------------------VFGKGIIIENSN--------TTF--L-TPVATGNQ----Y-----LKDGGFAFP--------------------------------------------------PTEPLM----SPMTLD-------EMRHFYK--D--------NKYVKN--LDELTLCSRHAGNM--IPDSNYKYPAVYDDKDCHI-LY---IAAQENNGPRYCNKDESK-------------------RNSMFCFRPAKDIS----FQNY---------------------------------------------------- | |||||||||||||
5 | 2pffB | 0.15 | 0.02 | 0.16 | 0.57 | MRFsearch | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VRVIVAGTLD-INPDDDYGFKQ--------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----- | |||||||||||||
6 | 2xd8A | 0.09 | 0.07 | 0.80 | 0.50 | FFAS-3D | -----RTLKNGKSLQFITGRMTSSFHTPGTPILGNADKAPPVAEKTIVMDD------LLISSAFVYDLDETLAHYELRGEISKKIGYALAEKDRLIFRSITRGARSASPVSATNFVEPGGTQIRVGSGTNESDAFTASALDAAAAMDEKGVSSQGRCAVLNPRQYYALIQDIGSNGLVNRDVQGSALQSGNGV--------------IEIAGIHIYKSMNIPFLGKYGVKYGGTTGETSPGNLGSHIGPTPENANAT------------GGVNNDYGTNAELGAKSCGLI------------------FQKEAAGVVEAIGPQ------------------VQVTNGDVSVIYQGDVILGRMA----MGADYLNPA | |||||||||||||
7 | 5jcss | 0.12 | 0.10 | 0.82 | 1.10 | SPARKS-K | TIRFLASILGPRVDVFSMNSDIDSMDILGGYEQVDLTRQISYITEELTN-----IVREIISMNMKLSPNATAIMEGLNLLKYLLNNIVTPEKFQDFRNRFNRFFSHLEGHPLLK-TMSMNIEKMTEIITKEASVKNSLLEIDGSLLNECSQEDGQPRVLKPHPNTMD-----------PKYGELSRARGVEIYIDEL---HSRSTAFDRLTLGFELGENIDFVSIDDGIKKIKLNE-PDMSIPLKHYVPSYLSRPCIF--------------------AQVHDILLLSDE-------------------EPIEESLAAVIPISHLGEV---GKWANNVLNCTEYSEKKIAERLYVITFLTDMGVLEKINNLYK--- | |||||||||||||
8 | 1xtkA | 0.22 | 0.05 | 0.20 | 0.27 | CNFpred | --------------------------------------------------------------------------------------------------------------------------------------------------------------------VLATLQQLEPVTG---------QVSVLVMCHTRELAFQISKEYERFSK---YMPNVKVAVFFGGLSIKKDEEVL-----------------CPHIVVGTPGRILA----------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 5t8vA | 0.04 | 0.03 | 0.67 | 0.67 | DEthreader | -----INQVMEADPLRPALEEKMTETVVNRFSDAGPGV-----------RKRAMKLAKDIYLRSR----L-------VDLARQEEIWHVILMVLVMVLMIVRAVVDVCLWISTLGTYELARLVISSLKGIKTSAQPLDSWPLVRALAFQQVFDDQI----------------------------------------------LRSLKELFEESYDDVAATTFLKDI------------------VLSINRQ--------G-TFITLATST-PR-SEAFH-----------REYAAISIAYDIVDKLLFMVLKISKAK----------KLVSQIDFDILVSTGASVAQVIESEVLTASILLAIWVRTYLRRLYSVKV | |||||||||||||
10 | 2atyA | 0.09 | 0.08 | 0.89 | 0.79 | MUSTER | ----------DISCGSPPPILNGRISYYSTPIAVGTVIRYSTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVQANNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCI-------CTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSVDDVEVHTAQTQP-REEQFNSTFRSVSELPIMHQ-----------------DWLNGKEFCRVN--SAAFPAPIEKTISKTKGRPKAPQLY---TIPPPKEQMAKDKMITDFFPEDITVE--WQWNGQPAENYKNTQPIMNTNESYFVYSKLNQKSNWEA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |