>PF02124 (204 residues) RAEFVWFEDGRRVFDPAQIHTQTQENPDGFSTVSTVTSAAVGXQGPPRTFTCQLTWHRDS VSFSRRNASGTASVLPRPTITMEFTGDHAVCTAGCVPEGVTFAWFLGDDSSPAEKVAVAS QTSCGRPGTATIRSTLPVSYEQTEYICRLAGYPDGIPVLEHHGSHQPPPRDPTERQVIRA VEGAGIGVAVLVAVVLAGTAVVYL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | RAEFVWFEDGRRVFDPAQIHTQTQENPDGFSTVSTVTSAAVGXQGPPRTFTCQLTWHRDSVSFSRRNASGTASVLPRPTITMEFTGDHAVCTAGCVPEGVTFAWFLGDDSSPAEKVAVASQTSCGRPGTATIRSTLPVSYEQTEYICRLAGYPDGIPVLEHHGSHQPPPRDPTERQVIRAVEGAGIGVAVLVAVVLAGTAVVYL | |||||||||||||||||||
1 | 4grgC | 0.13 | 0.10 | 0.79 | 0.52 | DisCoVER | TVNLTWSRASGKP--VNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPR---ALMRSTTKTPRAAPEVYAFATPRTLACLIQNFMPDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRWEKDEFICRAVHEAASSQTVQRA--------------VSVN------------------------ | |||||||||||||
2 | 6ovnB | 0.11 | 0.09 | 0.82 | 0.49 | CEthreader | HRAMYWYKQKLMFVYSYEKLSINESVPSRFSPESLLNLHLHALQPDSALYLCASSPLGREGLNTEAFFGQGTRLVFPPEVAVFEQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPLKEQPALSRYALSSRLRVSNPRNHFRCQVQFYKPVTQIVSAEAWGRAD------------------------------------ | |||||||||||||
3 | 6jxrn | 0.10 | 0.09 | 0.96 | 0.65 | EigenThreader | EYMSWYRQ---DPGMG--LRLIHYSVGAGITDQGVSRLLSAA--PSQTSVYFCASRRRQGASGEQYFGRLTLKNVFPPEVAVFEAT--LVCLATGFYPDHVLSWWVNGKHSGVSTDPQPLKEQPLNDSRYCLSSRLRVNPRNHFRCQVQFYGLKPVTQIVSAEAWGRADCGFTSESYQQGVLSATILYEILLGKATLYAVLVSA | |||||||||||||
4 | 2wngA | 0.18 | 0.14 | 0.75 | 0.94 | HHpred | DITLKWFKNGNELSD-F-QTNVDPVGESVYSIHSTAKVVLTREDVH-SQVICEVA-HVTLQGPLRGTANLSETIRVPPTLEVTQQENNVTCQVRFYPQRLQLTWLENGNVSRTET---ASTVTENKDGTYNWMSWLLVDV---KLTCQVEHD--GQPAVSKSHDL--------------------------------------- | |||||||||||||
5 | 1o0vB | 0.22 | 0.18 | 0.81 | 0.48 | MRFsearch | -IQITWLEDGQVMDVDLSTASTTQEG-ELASTQSELTLSQK--WLSDRTYTCQVTYQ--GHTFEDSTKKCADSNPRGVSAYLSRPSPTITCLVVDLAGTVQLTWSRASGKPVSTRKEEKQR-----NGTLTVTSTLPVWIEGETYQCRVTHP-HLPRALMRSTTKTSG---PRAAPEVYAF----------------------- | |||||||||||||
6 | 4grgC | 0.15 | 0.12 | 0.80 | 0.83 | FFAS-3D | TVNLTWSRASGKPVN-HSTRKEEKQRNGTLTVTSTLPVGTRDWIEGE-TYQCRVT-HPHLPRALMRSTTKTSGPRAAPEVYAFATPETLACLIQNFPEDISVQWLHNEVQLPDARHSTTQPR-KTKGSGFFVFSRLEVTEQKDEFICRAV-HEAASPSQTVQRAVSVNP----------------------------------- | |||||||||||||
7 | 6kxsA | 0.08 | 0.07 | 0.90 | 0.77 | SPARKS-K | SVTISWTRQNGEAVKTHTNISES-HPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLLNLRTITCLVTGSPADVFVQWMQRGQPLSPEKYVTSAPMPEPAPGRYFAHSILTVSNTGETYTCVVAHEALPNRVTERTVDKSTGPTLYNVSLVMSDTAGTCY------------------- | |||||||||||||
8 | 2j6eA | 0.14 | 0.11 | 0.76 | 1.05 | CNFpred | EVKFNWYVDGVEVH--NAKTKPREEQYSTYRVVSVLTVLHQD-L--GKEYKCKVSNKAL-PAPIEKTISKAKGQPREPQVYTLP-QVSLTCLVKGFYPDIAVEWESNGQPENNYKTTPPVLDS---DGSFFLYSKLTVDK-GNVFSCSVMHEALHNHYTQKSLSLS-------------------------------------- | |||||||||||||
9 | 6kxsA | 0.08 | 0.07 | 0.90 | 0.71 | MUSTER | SVTISWTRQNGEAVKTHTNISES-HPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLLNLRTITCLVTGSPADVFVQWMQRGQPLSPEKYVTSAPMPEPAPGRYFAHSILTVSNTGETYTCVVAHEALPNRVTERTVDKSTGPTLYNVSLVMSDTAGTCY------------------- | |||||||||||||
10 | 6jxrn | 0.10 | 0.10 | 1.00 | 0.49 | CEthreader | HEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPNGYNVSRSTTEDFPLVYFCASRRRQGASGEQYFGPGTRLTVVFPPEVAVFEQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPLKEQPALSRYCLSSRLRVSNPRNHFRCQVQFYGPVTQIVSAEAWGRADCGFTSESYQQGVLSATILYEILLGKATLYAVLVSAL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |