>PF02092 (551 residues) LLLEVGTEEIPARFMEATLSQLKKITEEKLAEERLVFKEVSTYGTPRRLALYVTGLEEKQ EDLVEEVKGPSQRVAFDEEGRPTKAAKGFARSQGVAVEELVVKETRGGAYVYAIKKKEGI PTIQVLPSLLPQLIRGLSFPKPMRWGNGEMRFARPIRWLVALYGEEVVGFSLAGLVADRL TRGHRFLCPEPIVLKQPADYFSELEKGFVIVDQNRRRQMIWEQVQNLAEEIGGRVEPDEE LLEEVTYLVEYPTALVGSFAEEYLQLPEEVLITPMREHQRYFPVRDREGRLLNRFITVRN GTSDHLEIVREGNEKVLRARLADAKFFYQEDLKYRLADKVEKLKEIVFQERLGTVWDKVE RLKPLTRYLITVLGMDAGLIPAAERAAYLCKADLVTNMVYEFPELQGIMGYYYARHDGEE DRVSMAIREHYLPRFAGDVLPQSPLGMVLSIADRIDSIVGCFAVGIQPTGSQDPYALRRQ ALGICNIILERGLEFSLHQLIRQAYGLYRDKTELEFSEAEVVEQVGSFFRQRLENILEEK GIRYDVVKAVV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LLLEVGTEEIPARFMEATLSQLKKITEEKLAEERLVFKEVSTYGTPRRLALYVTGLEEKQEDLVEEVKGPSQRVAFDEEGRPTKAAKGFARSQGVAVEELVVKETRGGAYVYAIKKKEGIPTIQVLPSLLPQLIRGLSFPKPMRWGNGEMRFARPIRWLVALYGEEVVGFSLAGLVADRLTRGHRFLCPEPIVLKQPADYFSELEKGFVIVDQNRRRQMIWEQVQNLAEEIGGRVEPDEELLEEVTYLVEYPTALVGSFAEEYLQLPEEVLITPMREHQRYFPVRDREGRLLNRFITVRNGTSDHLEIVREGNEKVLRARLADAKFFYQEDLKYRLADKVEKLKEIVFQERLGTVWDKVERLKPLTRYLITVLGMDAGLIPAAERAAYLCKADLVTNMVYEFPELQGIMGYYYARHDGEEDRVSMAIREHYLPRFAGDVLPQSPLGMVLSIADRIDSIVGCFAVGIQPTGSQDPYALRRQALGICNIILERGLEFSLHQLIRQAYGLYRDKTELEFSEAEVVEQVGSFFRQRLENILEEKGIRYDVVKAVV | |||||||||||||||||||
1 | 3tm8A | 0.10 | 0.05 | 0.52 | 0.54 | DisCoVER | MDYVSIRVS----------------------------------TLRG-----------DQKIDFNAYVK------------------------------------INDKMILYLRRGDSFEGERLKR-------------L-KD--------KKLRKMYILTDE------------ENS-----------------------------YRTYLQKNIETA------------YDDTTGKDIQTRADIIQGSQQN----NAEEVFENPENVESYNYCKDAAGKYVNFIM---SNAQALSAVM-------------------------------------------NIENT-DK-TISHHGVTVSTLSIALAQKI-TDPKKTQLLTLGALLHDYGHHPEDLALWKK-HPIEGAQKVQKKHFDQTVINIIGQHEETINGTGPREMDPLAVLVSSANAMDRLIT---F-EGVPKAEAAKKLMIDHVG--KH-----PQH-IQHLNDILK-G-------------------------------------------- | |||||||||||||
2 | 4mcwA | 0.11 | 0.06 | 0.60 | 0.84 | CEthreader | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPERKLKILLDYSSKIANEKDLRNVLLFLTDLAKEIMEADRADQKKTLWTIVAHGVDRIEIDADKGIAGYVFRTGEILNIPDAYKDPRFDRDIDKRTGYRTRTILAVPLFDRKQNIIGVFQVINKLTNSVFTEEDIELLRHISLYASSTIENAILYEKLKKAHEDVIYRLSHATKFKDPEQNHIIRVGLYAEILAREAGLDEEDVELVKLAAPMHDIGKVGIPDREIMKKHTIYGYEILKGGDLLQIAADIAIEHHERWDGTGGEEISIYGRMTSISDVFDALTSDRPYKKAWDMDRTVRFFKEQKGKHFDPFLTDIFLKNIDQMFSIKRELR------------------------------------------- | |||||||||||||
3 | 4mcwA | 0.11 | 0.06 | 0.54 | 0.85 | EigenThreader | ----------------------------------------------------------------------------------------------------------------------DPERKLKILLDYSSKIANEKDLRNVLLF--LTDLAKEIMEFLYDDQKKTLWTIVIEIDADK------------------------------------------GIAGYVFRTGEILIPRFDRDIDKRTGYRTRTILAVPLFDR-------------------------KQNIIG-VFQVINKLTNSVFTEDIELLRHISLYASSTIENAILYEKLKKAHEDVIYRLSHATKFKDPETQNHIIRVGLYAEILAREAGLDEEDVELVKLAAPMHIYGYEILKGGDSRLLQIAADIAIEH---HER-----------WDGTGKGEEISIYGRMTSISDVFDALTS----DRPYKKAWDMDRTVRFFKEQKFLTDIFLKN--IDQMFSIKRELR------------------------------------------- | |||||||||||||
4 | 4mcwA | 0.15 | 0.08 | 0.56 | 0.44 | HHpred | --------------------------------------------------------------------------------------------------------------------ANEKDLRNVLLFLTDLAKEIMEADRAFLYDDQKKTWTIV-------------------------AHG-----VDRIEIDADK------------------------GIAGYVFRTGEILNIPDAY--------KDP-----RFDRDI----DKR--TGRTRTILAVPLFDRKQNIIGVF-QVINKLTNTEEELLRHISLYASSTIENAILY--EKLKKAHEDVIYRLSHAT-KFKDPETQNHIIRVGLYAEILAREAGLDEEDVELVKLAAPMHKPGKLND--EEWEIMKKIYGYEILKGGDLLQIAADIAIEHHYPFGKGEEI--SIYGRMTSISDVFDALTS-----DRPY--KKAWD-MDRTVRFFKEQKGKHFDPFLTDIFLKNIDQMFSI---------------------------------------- | |||||||||||||
5 | 4mcwA | 0.14 | 0.07 | 0.52 | 0.45 | MRFsearch | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERKLKILLDYSSKIANEK-DLRNVLLFLTDLAKEIMEADRASIFLYDDIEIDADKGIAGYVFRTGILAVPLFDRKQNIIGVFQVINKLTTEEDIELLRHISLYASSTIENAILYEKLKK--AHEDVIYRLSHATKFK-DPETQNHIIRVGLYAEILAREAGLDEEDVELVKLAAPMHDIG-----DEEWEIMKKHTIYGYEILKGGDSRLLQIAADIAIERWDGTGYPFGIYGRMTSISDVFDALTSD-----------RPYKKAWDMDRTVRFFKEQKGK---------------------HFDPFLTDIFLKNIDQMFSIKREL------------ | |||||||||||||
6 | 6ao8A | 0.13 | 0.11 | 0.79 | 0.92 | FFAS-3D | ----------------NLHQTVEHEAAAAFAAAGIAGSPVVLQPTK-------------NAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGN-AVIESAEVAGPGFINLRLR------HEFLAQNIHAALNDARFGVAKQ--------------------PQTVVIDYSSPNAKEMHVGHEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDEQFYRAAKVRFDE-------DPAFADTAREYVV----KLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLR-----PEDVAGESKYNDDLQPVADDLASTDLACLRYRIGHRQALHFEQLFTTSRKAGFKTRSGDTVKLVDLLTEAVERATALVELGADEAAKIGKGIGAVKYADLSDYVFDWDAMAPYLQYAYTR-------VQSVFRKAGEWDATAPTVLTEPLEKQLAFENVLQSVA----------DTAYPHYLAAY----------------LYQAATLFSRFYEACPILKAEGASRNSRLAKLTGNTLKQGLDLLGID-------- | |||||||||||||
7 | 4fyeA | 0.12 | 0.11 | 0.93 | 0.86 | SPARKS-K | -----------------ITENIETYVTHLLSNQHLAYGERQVFKDPMKQVVVVNS--QYDKHGRPVTGQPAAKSLIDKDKKRKNAIDEMAKTFKIPSDKA------KAD-LF--SSKKSAKVEGSLQQFTQAVAKASGHKKAPNSKEGEEQFIRYTKRQQRLLGNSSMARMIAGTRHGTVTIHHSFSGPGARDFKGADDYKKLAIKAVTLINEEVIQTLAQRQIDDLWNKRPDELPPDEKARAQLIKLYVEPLSVTECYAENQ-KEQFEYVRQMMDAFDKITIQTGSNTAVGYQARMSSWGVNWDNSVTKNQNARFVNQMTDDVIRNLDKVAQNKAGALHTLLKGPVITEKENALKEVKGAYREALFSYFEEYQKGEGKWDQLKNQVDGYEKSIKKQESAIYNQIDALRKAYYTEHKGQINKALQELKEQISPQNKETD-PETNSCAYLTQAQELYYLMASLSCELDYKSNND-RGQRLAQKIVGNALWTAMSEDGLGEFLDH-------RRTHGKEVSNVEQLDRELTTIQALHHTANTGVSGGKFEIQD | |||||||||||||
8 | 3m1iC | 0.11 | 0.09 | 0.84 | 1.08 | CNFpred | YLIQLSKIE-ERELFKTTLDYWHNLVADLFYEPLK--KHIYEEICSQLRLVIIENMVRPEEVLVVEN-----GEIVREFVKESDTIQLYKSEREVL------------VYLTHLN---VIDTEEIMISKLARQIDG----SEWSWHN-----INTLSWAIGSISGTMS---------------------EDTEKRFVVTVIKDLLDLTVKKRGKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILKL---FEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQP-RESEPFIQTIIR----DIQKTTADLQPQQVHTFYKACGIIISEE--SVAERNRLLSDL--------MQLPNMAWDTIVEQSTANPTLLL-DSETVKIIANIIKTAVCTSMGADFYPQLGHIYYNMLQL---YRAVSSMISAQVAA---LIATKTPKVRGLRTIKKEILKLVETYISKAR----NLDDVVKVLVEPLLNAVLEDYRDAEVLNCMTTVVEKVGH------MIPQGVILILQSVFECTLDMINKDTEYPEHRVEFY | |||||||||||||
9 | 3m1iC | 0.07 | 0.05 | 0.64 | 0.67 | DEthreader | --------------------------------------------------------------------KSIFKLCFQVLEQGSSSLIVATLE---------PYRYI-ETNILLSFFLLAHQLIQLSKILFKTLNMVRPEEVLVVENDEEVKESDTI-YERVLLNDTIMK----SWHNINTLSWAI-G-------MS-DTEKRFVVTVIIYVVGQYPRFLKAHW--LR-------------CDTFIKIVQKCKHFFIQTIR-------------VHTFYKACIISERSVAERNRLLS----------------DL--MQLPNMAWDTIVETYNMLQLYRASSMISAQVA-EGLIAT--------------------------------------GLRTIKKEILKLVETYI--------KVLVEPLLNVVLCMTTVVEKVGHMIPQGVILILQSVFECTLDMIN-K-DFT--EYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKL------------FVDAICWAFKHVEVNGLQIALDLVKSKALLLKLI | |||||||||||||
10 | 1b3uA | 0.14 | 0.12 | 0.88 | 0.56 | MUSTER | KKL--------STIALALVERTRSELLPFLTDT-IYDEDEVLLA----LAEQLGTFTTGGPEYVHCLLPPLESLATVEETV-DKAVESLRAISHHSPSDLEAAGGDWTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEAVNIAQ---LLPQEDL----EALVMPTLRQAA--DKSWRVRYMVADKFTELQKAVGPEITK-TDLVPAFQNLMKDCAAASHKVKEFCENLSADCRENVIMSQ--ILPVSDANQHVKSALAVIMGSPILGKDNTIEHLLPLFLAQLKD-----CPEVRLNIISNLDCVNE---------VIGIRQLSQSLLPAIVELAEDAK---WRVRLAIIEYMPLLAGQLGVEFFD-EKLNSLCMAWLVDHVYAIREAATSNLK------KL--EKFGKEWAHATIIPKVLAMSG-------DPN-YLHRMTTLFCINVLSEV---CGQDITTKHMLPTVLRMA--GDPVANVRFNVAKSLQKIGPIL-DNSTLQSEVKPILE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |