>PF02077 (267 residues) NEMLAKAEDAAEDFFRKTRTYLPHIARLCLVSTFLEDGIRMYFQWDDQKQFMQESWSCGW FIATLFVIYNFFGQFIPVLMIMLRKKVLVACGILASIVILQTIAYHILWDLKFLARNIAV GGGLLLLLAETQEEKASLFAGVPTMGDSNKPKSYMLLAGRVLLIFMFMSLMHFEMSFMQV LEIVVGFALITLVSIGYKTKLSAIVLVIWLFGLNLWLNAWWTIPSDRFYRDFMKYDFFQT MSVIGGLLLVIAYGPGGVSVDDYKKRW |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | NEMLAKAEDAAEDFFRKTRTYLPHIARLCLVSTFLEDGIRMYFQWDDQKQFMQESWSCGWFIATLFVIYNFFGQFIPVLMIMLRKKVLVACGILASIVILQTIAYHILWDLKFLARNIAVGGGLLLLLAETQEEKASLFAGVPTMGDSNKPKSYMLLAGRVLLIFMFMSLMHFEMSFMQVLEIVVGFALITLVSIGYKTKLSAIVLVIWLFGLNLWLNAWWTIPSDRFYRDFMKYDFFQTMSVIGGLLLVIAYGPGGVSVDDYKKRW | |||||||||||||||||||
1 | 3rkoB | 0.07 | 0.07 | 0.91 | 1.14 | CNFpred | NMLMWATLMLLGGAVGKSQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACEQNIFKMGGLR------KSIPLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHA---GVTHSLPLIVLLILSTFVG--------------- | |||||||||||||
2 | 6i1rA | 0.08 | 0.06 | 0.72 | 0.65 | DisCoVER | --------MQWYLVAALLTILTS-SQGILTTLSN-YDYATIPF-LAELFKLSVSG-------------------FFLWKECR------TSPSVRMTKEWRSVRLYVVPSVIYLIHNNVQFATLTYVDPSTYQIMGNLLLAVGTTTSQ---VKGCDPLEGYLLGILSACLSALAGVYTEYLM--------------------------------KKNNDSLYWQNVQLYTFGVIFNMGYSITTWMVVFNLSMAMLQLLGIIIC----- | |||||||||||||
3 | 3d19A | 0.06 | 0.04 | 0.79 | 1.00 | DEthreader | ------------------DTGVTRNEIRFWSRIMKEHSFFL---R--L---G---F-R-CED-TQLIEEANQFYRLFEHIEIAFNEVQQAATNIWGFKRKILLILCPGQN-NFPLLVDHTSREADYFRKRLIQLNEGK----L-DALP-DAIIKENVFFLRIMADHAKFIGHLDPEKLVDTARNFSNDFDELMQAFLDNRVSVASLRDFKKTARDLIEQC--------KS-IIH--PLLADHVFREADRFLEIIDMY---DV---HL | |||||||||||||
4 | 3ea5B2 | 0.05 | 0.05 | 0.90 | 0.59 | CEthreader | --VEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPY--LLKALNQVDSPVSITAVGFIADISN--SLEEDFRRYSDAMMNVLAQMISNNARRELKPAVLSVFGDIASNIGADFIPYLNDIDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMFPDGSIKQFYGQDWVIDYIKR-----TRSGQLFSQATKDTARWAREQQKRQLSL----------------- | |||||||||||||
5 | 3d19A | 0.05 | 0.04 | 0.80 | 0.85 | EigenThreader | ----------------------DVERSLNEIRFWSRIMKEH-------SFFLRLGFRCEDTQLIEEANQFYRLFEHIEQIAHIKRFNAEVQQAATNIWGFKRKILGLILTLLVDHTSREADYFRKRLIQLNEG----------KLDALPDAIIKENVFFLRIMADHAKFIGHLLDERKLVDTARNFSNDFDELMFLDQNRVSVASLRDFKKTARDLIEQCKIKSIIH---------PLLADHVFREADRFLEIIDMYDVHL------ | |||||||||||||
6 | 1vt4I | 0.12 | 0.11 | 0.94 | 0.29 | HHpred | KSILEEIDHIMSGTLRLFWTLLSKQE--EMVQKFVEEVLRINYKYIEQRDRLDNQYNVSRLQP-YLKLRQALLELDVCLSYKVQNSPETVLEMLQKLSNIKLRIHSIQAELRRLLKSKPYENCLLVLLVQNAKAWNANLSCILLTRF-KQVTDFLSAATHISVKSLLLKYLDETTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLMFDRLSVFPSAPWFDVIKSDVM---VVV--------NKLHKYSLVEKQPK- | |||||||||||||
7 | 2q6hA | 0.11 | 0.10 | 0.88 | 0.55 | MRFsearch | --LIRGISKGIERFAKIAMPTLFILAVFLVIRVFLADGLNFLWTAAVGQIFFTLSLGFGAIIGLTAATLNEKAEVILGGSISIPAAGAFNLGFITLPAIFSQTAGGTFLGFLWFFLSIAIMQPMIAFLEDELK---------------LSRKHAVLWTAAIVFFSAHLVMFEMDFWAGTIGVVFFGLTELIIFFWIFVMRYITPAFLAVLLVVWAREYIPKIM-EETHWTVWITRFYIIGLFLFLTFLVFLAER------------- | |||||||||||||
8 | 6x18R2 | 0.11 | 0.10 | 0.93 | 0.98 | FFAS-3D | ----PEEQLLFLYIIYTVGYALSFSALVIASAILL-----GFRHLHCTRNYIHLNLFASFILRALSVFIKDAALKWMYSTAAQQHQWDRLVFLLMQYCVAANYYWLLVEGVYLYTLYVSIGWGVPLLFVVPWGIVKYLYEDEGCWTRNSNMNYWLIIRLPILFAIGV-----------NFLIFVRVICIVVSKLKANCRLAKSTLTLIPLLGTHEVIFAFVMDEHARGTLRFIKLFTELSFTSFQGLMVAILYCFVNNEVQLERKSW | |||||||||||||
9 | 5xjjA | 0.07 | 0.07 | 0.99 | 0.91 | SPARKS-K | GELQLSGVALATSFTNVTG-FSIMYGLVGALETLCGQAYGIGTYTYSAIASNIPICFIAGSYAFWLIPVLFAQAIVIPLTRFLLGLVLPLLYTAVTTLLFHVFVCWVFVLSNGPAMATSVSFWFYAVILSCYVRFSSSCEKTRGFVSEDFVSCVKQFFQYGVPSAAMICLEWWLFELLILCSGLLPKLETSVLSICLTTETLHYVISSGVAAAVSTRVSNNLGAGN---PQVARVSVLAGLCLWLVESAFFSILLFTFRNIIGYAFS | |||||||||||||
10 | 4he8F | 0.07 | 0.06 | 0.90 | 1.08 | CNFpred | DLLALAGLLLFLGAVGKS-AGPTPVSALIHAATMVTAGVYLIARSSFLYSV-------LPDVSYAIAVVGLLTAAYGALSAFGQKIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIHALEQDVRKMGGLW-----KHLPQTRWHALIGALALGGLPLLSGFWSKDAILAATLTYPFGGVGFYVGALLVAVLTAMYAMRWFVLVFLGEERGHHHPHEAPPVMLWPNHLLALGSVLAGY-------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |