Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | VDGEESGAGTGTGAGADGLYPTSTDTAAHAVSLPRSVGDFAAVVRAVSAEAADALRSGAGPPAEAWPRVYRMFCDMFGRYAASPMPVFHSADPLRRAVGRYLVDLGAAPVETHAELSGRMLFCAYWCCLGHAFACSRPQMYERACARFFETRLGIGETPPADAERYWAALLNMAGAEPELFPRHAAAAAYLRARGRKLPLQ |
1 | 3himB | 0.09 | 0.06 | 0.65 | 0.58 | DisCoVER | | ARIRAAAIEVFAY-TTTREIAASLMSPGAVLLYAISLEGHHSVLMSTVTAYVT------------------WHADN---RASARVGELSLSPEHFAII---------------------------IRRST-----------TKVFTRIIEAGADFHPFIEA-A--AL-AITSLGVSPRIIAARYVELALRMVG----CA-- |
2 | 6lodF | 0.06 | 0.05 | 0.77 | 0.83 | DEthreader | | -----YLF-AYFFLVAWT-AA-----DWGMSLEFSMYPVTYIASMLILTFGGGIALFIRLHLGKFLFAFVAVWAYVFSEYLIIWNLTPWHRSELGIVMIFGHFLLFMLAKNLTAIAIYLYLIEIVWYFWKIMPAFHPGFHIHWLDLVTLIA----I-GG--LWLGVFA----------------------------WNLAL |
3 | 3tm8A | 0.11 | 0.10 | 0.96 | 0.57 | CEthreader | | ILTDEENSYRTYLQKNIETAYDDTTGKDIQTRADIIQGSQQNNAEEVFEN---------PENVESYNYCKDAAGKYVNFIMSNAQALSAVMSHHGVTVSTLSIALAQKLGITDPKKTQLLTLGALLHDYGHHHSPHFDQTVINIIGQHEETINGTGPKGLAVLVSSANAMDRLITFEGVPKAEAAKKLMIDHVGKHPLQHI |
4 | 3p8rA | 0.07 | 0.06 | 0.97 | 0.65 | EigenThreader | | RIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMDLDTPASAVECIHAYSLIHDDDDEATAILTGDALQTLAFTILAEG--DLSAAGETQRVAMLQALAEASGAENRLISLEELETIHRNKTLMRCAIRLGALAAGEKGRAPHLDRYAEAVGLAFQVQDDILDIILQEALLALEAIPYNTEHLEEFARYVVERKN----- |
5 | 5mjoA | 0.18 | 0.08 | 0.48 | 0.30 | HHpred | | -------------------------------------------------------------------TVSDTKRAFYAAHT-------RPIHSIRRFIEELLVEI-------HL--------------LRVNVDFRYSPLFALGVVTAFDQ-FMEGYQPEGDRDRIFHALCVAEEMNPQQLKEDAASWQQYQG-------- |
6 | 5cskA | 0.12 | 0.10 | 0.83 | 0.47 | MRFsearch | | -----------------------SEWKLHISALPAKLDEQMEELVARSKLIDMAVKNPEYNPDKLLGAVVEPLADIAHKYSN--GLEAHEHSIFVHFLEEYYEVEKLGPNVREENIILKLRDKVALTVLSHSKVSAKNNLILAILKHYQPLC----KLSSKVSAIFSTPLQHIVELESKATAKVALQAREILIQG------ |
7 | 1h0aA | 0.10 | 0.07 | 0.74 | 0.67 | FFAS-3D | | ----------------------------STSSLRRQMKNIVHNYSEAEIKVREATSNDPGPSSSLMSEIADL---------------TYNVVAFSEIM-SMIWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLFQYVDRDGKDQGVNVREKAKQLVALL-RDEDRLREERAHALKTKEK------- |
8 | 5cwfA | 0.16 | 0.13 | 0.86 | 0.65 | SPARKS-K | | --------------MSDEMKKVMEALKKAVELAKKNDDEVAREIERAAKEIVEALRENN---SDEMAKVMLALAKAVLLAAKNNDD--EVAREIARAAAEIVEALRENNSD---EMAKVMLALAKAVLLAAKNDDEVAREIARAAAEIVEALRENNSEMAKKMLELAKRVLDAAKNDDETAREIARQAAEEVEAD------ |
9 | 1ezfA | 0.08 | 0.06 | 0.77 | 0.69 | CNFpred | | --------------------------AAVIQALDGEMRNAVCIFYLVLRALDTLEDDMT-ISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVA-----------GLVGIGLSRLFSASEFEDPLVGEDTERANSMGL-------- |
10 | 4kf7A | 0.05 | 0.04 | 0.78 | 1.00 | DEthreader | | ---------------------------------DALAPTYIRTLEGCFDRMQMAPELEEVDWRTALTEAIHAMSLIFQILDLKASQFAALVTQWFALMDTCEFFEPVPRGHE-LIAELLMPLHSLVAAISLKLYMHTIAAAAAGLIST--------GRGQVY--ELMADMAVCGQLAAFRPVLGARARLTFQDLRSPLLSI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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