>PF02040 (423 residues) LAVFIFLLTLVLVIWQPKNLSIGWSACGGAVLALIAGVVNFHDVLTVTGIVWNATLAFVA IILISLILDNIGFFEWAALHMAKAAKGYGVRMFVYVSLLGAIVAALFANDGAALILTPIV LAMVRALHFNEKLVFPFIIASGFIADTTSLPFVVSNLVNIVSADYFHITFIDYASRMVVP YLFSLLASIIVLYLFFRKSIPKRYDLTEVKKPVEAIKDQNMFRLSWYILGLLLIGYFASE FFSIPVSVVAGSIAIIFLIAAQKSPAVHTKKVVKEAPWAIVFFSIGMYVVVYGVRNAGLT DVLSDVIQAAADQGLFAGTIGMGFIAAILSSIMNNLPTVMIDALAIAGTDTHGMMREALI YANVIGSDLGPKITPIGSLATLLWLHVLSHKGMKISWGTYFKTGIILTIPTLLITLVGLY IWL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LAVFIFLLTLVLVIWQPKNLSIGWSACGGAVLALIAGVVNFHDVLTVTGIVWNATLAFVAIILISLILDNIGFFEWAALHMAKAAKGYGVRMFVYVSLLGAIVAALFANDGAALILTPIVLAMVRALHFNEKLVFPFIIASGFIADTTSLPFVVSNLVNIVSADYFHITFIDYASRMVVPYLFSLLASIIVLYLFFRKSIPKRYDLTEVKKPVEAIKDQNMFRLSWYILGLLLIGYFASEFFSIPVSVVAGSIAIIFLIAAQKSPAVHTKKVVKEAPWAIVFFSIGMYVVVYGVRNAGLTDVLSDVIQAAADQGLFAGTIGMGFIAAILSSIMNNLPTVMIDALAIAGTDTHGMMREALIYANVIGSDLGPKITPIGSLATLLWLHVLSHKGMKISWGTYFKTGIILTIPTLLITLVGLYIWL | |||||||||||||||||||
1 | 6wtxC | 0.13 | 0.12 | 0.93 | 1.33 | DEthreader | SMLAFIAVLWL-TEAL----HVTVTAILVPVMAVFFGIFETQAALNN-F-ANSIIFLFLGGFALAAAMHHQGLDKVIADKVLAMAQGKMSVAVFMLFGVTALLSM-WI--SNTATAAMMLPLVLGVLSVDDRTYVFVLLGVAYSASIGGIATLVGSPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYFLLKP-TLNGMFELD-RA--PVN-WDKGKVVTLGIFGLTVFLWFSINALFSFDTLVALGAILMLSFARV----VHWKEIQKTADWGVLLLFGGGLCLSNVLKQTGTSVFLANALSDMVSHGIFVVILVVATFVVFLTEAASAALLIPVFATVAEAFG----MS--PVLLSVLIAVAASCAFMLPV-ATPPNAIVFA--SGHIKQSEMMRVGLYLNIACIGLLTAIAMLFW | |||||||||||||
2 | 6wtwA | 0.10 | 0.09 | 0.96 | 1.33 | DEthreader | QAWEMFAIFVATIVGPLPGGTTLGMVTVLAPVKDVVNSKGVVIQT----SS--GNSAAWLIAMAFIMAHGITLGNRVAYVMIEKFGKRSIGIGYAITGLELMMGAIPSNSARTGVTWPVVESISKSYDSSRKKIAYLDFMAFHANILSTALFITGAAPNLVAQQMAAQMSWSWFWAALVPVLVATVIIPLVIYKMPPEVKETPNAKNWAKLEMGPISKKIMATVFCLAILLWVL-SGFF---KIP-QLDSAFVAFLAVTLLLTGVLSMALHETGAWILIWLSILIFMAGKLISY--GFIAWFAKFIQSEVHGINWGLVLVVLILLMFYTHYFFASGAHMTALYLPFLTVTAMGAPLGLSAMLLAFTGVINASTTHYANGPASILATTG----Y-VKQSEWWKMNFILGLIYMVIFGIVGTIMW | |||||||||||||
3 | 6wtxC | 0.15 | 0.14 | 0.96 | 5.17 | HHpred | LGISMLAFIAV--LWLTEALHVTVTAILVPVMAVFFGIFETQAALN--NFANSIIFLFLGGFALAAAMHHQGLDKVIADKVLAMAQGKMSVAVFMLFGVTALLSMWISNTATAAMMLPLVLGVLSKVDADKQRYVFVLLGVAYSASIGGIATLVGSPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYFLLKPTLNGMFELD-----RAPVNWDKGKVVTLGIFGLTVFLWIFSSPINSFDTLVALGAILMLSF----ARVVHWKEIQKTADWGVLLLFGGGLCLSNVLKQTGTSVFLANALSDMVSHGIFVVILVVATFVVFLTEFASNTASAALLIPVFATAEAFGMSPVLLSVLIAVAASC-AFMLPVATPPNAIVFAS----G-HIKQSEMMRVGLYLNIACIGLLTAIAMLFW | |||||||||||||
4 | 6wtxC | 0.15 | 0.14 | 0.94 | 1.25 | DisCoVER | LGISMLAFIAVLWLTEA--LHVTVTAILVPVMAVFFGIFETQAALNNFAN--SIIFLFLGGFALAAAMHHQGLDKVIADKVLAMAQGKMSVAVFMLFGVTALLSMWISNTATAAMMLPLVLGVL--SKVDRSTYVFVLLGVAYSASIGGIATLVGSPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYFLK--PTLNGMFE--L--DRAPVNWDKGKVVTLGIFGLTVFLWIFSNAFKSFDTLVALGAILMLSFAR--V-VH-WKEIQKTADWGVLLLFGGGLCLSNVLKQTGTSVFLANALSDMVSMGIFVVILVVATFVVFLTEFASNTASAALLIVFATVAEAFGMSPVLLSVLIAVAASCA-FMLPVATPPNAIV---F-ASGH-IKQSEMMRVGLYLNIACIGLLTAIAML-- | |||||||||||||
5 | 6wtxC | 0.15 | 0.14 | 0.96 | 0.50 | MRFsearch | --LGISMLAFIAVLWLTEALHVTVTAILVPVMAVFFGIFETQAALNNF--ANSIIFLFLGGFALAAAMHHQGLDKVIADKVLAMAQGKMSVAVFMLFGVTALLSMWISNTATAAMMLPLVLGVLSKVDADKQRYVFVLLGVAYSASIGGIATLVGSPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYFLLKPTLNGMFELDR-----APVNWDKGKVVTLGIFGLTVFLWIFSSPIKSFDTLVALGAILMLSFAR----VVHWKEIQKTADWGVLLLFGGGLCLSNVLKQTGTSVFLANALSDMVSMGIFVVILVVATFVVFLTEFASNTASAALLIPVFATAEAFGMSPVLLSVLIAVAASCA-FMLPVATPPNAIVFASG-----HIKQSEMMRVGLYLNIACIGLLTAIAMLFW | |||||||||||||
6 | 6wtxC | 0.14 | 0.14 | 0.96 | 2.44 | SPARKS-K | LGISMLAFIAVLWLTEA--LHVTVTAILVPVMAVFFGIFETQAALNNFANS--IIFLFLGGFALAAAMHHQGLDKVIADKVLAMAQGKMSVAVFMLFGVTALLSMWISNTATAAMMLPLVLGVLSKVDAQRSTYVFVLLGVAYSASIGGIATLVGSPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYFLLKPTLNGMFELDRAPV-----NWDKGKVVTLGIFGLTVFLWIFSSPILGGFKSFDTLVALGAILMLSFARVVHWKEIQKTADWGVLLLFGGGLCLSNVLKQTGTSVFLANALSDMVSHGIFVVILVVATFVVFLTEFASNTASAALLIPVFATVAEAGMSPVLLSVLIAVAAS-CAFMLPVATPPNAIVFA------SGIKQSEMMRVGLYLNIACIGLLTAIAMLFW | |||||||||||||
7 | 6wtwA | 0.13 | 0.13 | 0.96 | 1.55 | MAPalign | EMFAIFVATIVGCITK--PLPIGGTTLLGMVVTVLVGLAPVTGILSSFGN--SAAWLIAMAFIMAHGISKTGLGNRVAYVMIEKFGKRSIGIGYAITGLELMMGALISNSARTGGTWPVVESISKSYDSKRKIGAYLDFMAFHANILSTALFITGAAPNLVAQQMAQMSWVSWFWAALVPVLVATVIIPLVIYKMP--EVKETPAKNWADDKLKEMGPIKPEKIMATVFCLAILLWVLSGIPQLDSAFVAFLAVTLLLITV-----LSMEDALHEGAWNILIWLSILIFMAGKLISYGFIAWFAKFIQSEVHINWGLVLVVLILLMFYTHYFFAGTAHMTALYLPFLVATAMGAPLGLSAMLLAFTGVINASTTHYANGPASILATT-----GYVKQSEWWKMNFILGLIYMVIFGVGTIWMK | |||||||||||||
8 | 6okzC | 0.14 | 0.13 | 0.94 | 0.98 | CEthreader | LGISMLAFIAVLWLTE--ALHVTVTAILVPVMAVFFGIFETQAALNNFAN--SIIFLFLGGFALAAAMHHQGLDKVIADKVLAMAQGKMSVAVFMLFGVTALLSMWISNTATAAMMLPLVLGVLSKVDADRSTYVFVLLGVAYSASIGGIATLVGSPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYFLLKPTNWDKG-------------KVVTLGIFGLTVFLWIFSSPINAALGGFKS-FDTLVALGAILMLSFARVVHWKEIQKTADWGVLLLFGGGLCLSNVLKQTGTSVFLANALSDMVSMGIFVVILVVATFVVFLTEFASNTASAALLIPVFATAEAFGMSPVLLSVLIAVAASCA-FMLPVATPPNAIVFASG-----HIKQSEMMRVGLYLNIACIGLLTAIAMLFW | |||||||||||||
9 | 4r0cA | 0.13 | 0.13 | 0.98 | 1.29 | MUSTER | LFVWFCLLLLPLTAVLGALDVTATHTITAHSLLDADGLRYLFTTLVGNFTGFAPLGVVLVAMLGLGVAEQSGLLSVSLASLVRRSSGG---ALVFTVAFAGVLSSLTV-DAGYVVLIPLAGLVFQLAGRP---PIAGIATAFAAVSGGFSANLLVGPVDATLAGLSTVAATGNYWFIIASTFLVTGLVTLITRTLTEPR-LAHANTVADASVDAPQIHSRAMKWTGLTLAILLAGLALLPFIHGLVVIVALIAGICGAVYGRVSGQFNSGAVITAMEVGYLVLMFFAAQFVAWFNYSQLGLLLAVKGAAWLGVPKVVLLLLFVVLTALINLMISASAKWSILAPVFIPMMLLGISPEASQAAYRVGDSSTNIITPLMP-YFVLVLGFARRYQPETGIGTLIALMLPYSLTLLLGWSVLLGVWI | |||||||||||||
10 | 6wtwA | 0.13 | 0.13 | 0.97 | 4.53 | HHsearch | EMFAIFV--ATIVGCITKPLPIGGTTLLGMVVTVLVGLAPVKGILS--SFGNSAAWLIAMAFIMAHGISKTGLGNRVAYVMIEKFGKRSIGIGYAITGLELMMGALISNSARTGVTWPVVESISKSYDSKPNKIAYLDFMAFHANILSTALFITGAAPNLVAQQMYQMSWVSWFWAALVPVLVATVIIPLVIYKMYPPEVKETPNAKNWDKLKEMGPISKPEKIMATVFCLAILLWVLSGFFQLDSAFVAFLAVTLLLI----TGVLSMEDALHTGAWNILIWLSILIFMAGKLISYGFIAWFAKFIQSEVHGNWG-LVLVVLILLMFYTHFASGTAHMTALYLPFLTATAMGAPLGLSAMLLAFTGVINASTTHYANGPASILAT---TG--YVKQSEWWKMNFILGLIYMVIFGIVGTIWM | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |