>PF01824 (331 residues) MEEFQGYLELDKSRQHDFLYPLIFQEYIYALAHDHGLNRSILLKNVGYDNKSSSLIVKRL ITRMYQQNHLIISANDSNQNPFLGHNKNLYSQMISEGFAVIVEIPFSLRLVSSLEGKEIV KSHNLQSIHSIFPFLEDKFLHLNYVSDILIPHPIHLEILVQTLRYWVKDASSLHLLRFFL YEYRNWNSLITPKKSISIFSKRNQRLFLFLYNFHVCEYESIFVFLRNQSSHLRSTSSGVL LERIYFYGKIKHLVEVFANDFQAILWLFKDPFMHYVRYQGKSILASKGTPILMNKWKYYL VNFWQCHFYVWSQPGRIYINQLSNHSLDFLG |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MEEFQGYLELDKSRQHDFLYPLIFQEYIYALAHDHGLNRSILLKNVGYDNKSSSLIVKRLITRMYQQNHLIISANDSNQNPFLGHNKNLYSQMISEGFAVIVEIPFSLRLVSSLEGKEIVKSHNLQSIHSIFPFLEDKFLHLNYVSDILIPHPIHLEILVQTLRYWVKDASSLHLLRFFLYEYRNWNSLITPKKSISIFSKRNQRLFLFLYNFHVCEYESIFVFLRNQSSHLRSTSSGVLLERIYFYGKIKHLVEVFANDFQAILWLFKDPFMHYVRYQGKSILASKGTPILMNKWKYYLVNFWQCHFYVWSQPGRIYINQLSNHSLDFLG | |||||||||||||||||||
1 | 5g2xC | 0.17 | 0.15 | 0.87 | 1.89 | HHpred | LERISKNSQENIDEVFTRLYRYLLRPDIYYVAYQNLYSNKGA-STKGIADGFSEEKIKKIIQSLKDGTYYPQPVRRKSKMRPLGI-PTFTDKLIQEAVRIILESIYEPVF----E-DVSHGFRPQRSCHTALKTIKREFGGARWFVEGDIKGCIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENWQ-YHKTYSGTPQ--GGILSPLLANIYLHELDKFVLQLKMKFDR------ESP--E-------------------------RITPEKYVRYADDFIISVKGSKEDCQWIKEQLKLFIHNKLKMELSEEKTLITHSS-QPARFLG | |||||||||||||
2 | 5g2xC | 0.06 | 0.05 | 0.84 | 1.10 | DisCoVER | ---LYSNKGASTKGYPQPVR--R--MYIAKKNSKKMR--PLGIPTFDKIQEAVRIILE-SIYEPVFEDVSHGFRPQRSCHTALKTIKR---EFGGARWFVEGDIKAGYLENWHK--TYSGTPQGGILSP-LLANIYLHYVRYAFIISEKTIHSSQP-AR------FL-----------GY--DIRVKKRTLNGVELLIP---LQ-DKIRQF--IFDKKIAIWFPV-HRKYLIRDIICNYYGLASNFNQLNYFAY-LME-YSCLKTIASKKKTISMFKDGSGSWGIPYEIK--QG-K--QRRVLYGYARNTLENR-LKAKCCELCGTSDEN- | |||||||||||||
3 | 5g2xC | 0.19 | 0.15 | 0.78 | 1.07 | MRFsearch | -ERISKNSQENIDEVFTRLYRYLLRPDIYYVAYQNLY----------TADGFSEEKIKKIIQSLKDGRRMYIAKKNSKKMRPLGI-PTFTDKLIQEAVRIILESI-------------SHGFRPQRSCHTALKTIKREFGGARWFVEGDIKDNIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENWQYHKTYSGT-------ILSPLLANIYLHELDKFVLQLKMKFD-----------------------------------------PEKYVRYADDFIISVKGSKEDCQWIKEQLKLFIHNKLKMELSEEKTLITHS-SQPARFLG | |||||||||||||
4 | 5g2xC | 0.18 | 0.15 | 0.85 | 1.62 | SPARKS-K | LERISKNSQENIDEVFTRLYRYLLRPDIYYVAYQNLYSNK-GASTKGILDDFSEEKIKKIIQSLKDGTYYYIAKKNSKKMRPLGI-PTFTDKLIQEAVRIILESIYEPVFEDVSHG-----FRPQRSCHTALKTIKREFGGARWFVEGDIKGCIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENW---QYHKTYSGTPQGGILSPLLANIYLHELD---------------------------------------KFVLQLKMKFDRESEKYVRYADDFIISVKGSKEDCQWIKEQLKLFIHNKLKMELSEEKTLITHSSQ-PARFLG | |||||||||||||
5 | 5g2xC | 0.19 | 0.16 | 0.86 | 1.27 | MUSTER | LERISKNSQENIDEVFTRLYRYLLRPDIYYVAYQN-LYSNKGASTKGILDDFSEEKIKKIIQSLKDGTYYYIAKKNSKKMRPLGI-PTFTDKLIQEAVRIILESIYEPVFEDVSHG-----FRPQRSCHTALKTIKREFGGARWFVEGDIKGCIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENWQYHKTYS---GTPQGGILSPLLANIYLHELDKFVLQLKMK--------------------------------FDRESP--RITPEKYVRYADDFIISVKGSKEDCQWIKEQLKLFIHNKLKMELSEEKTLITHSSQ-PARFLG | |||||||||||||
6 | 5g2xC | 0.17 | 0.15 | 0.87 | 4.71 | HHsearch | LERISKNSQENIDEVFTRLYRYLLRPDIYYVAYQNLYSNKG-ASTKGILDGFSEEKIKKIIQSLKDGTYYPQPVRKKSKMRPLGI-PTFTDKLIQEAVRIILESIYEPV----FE-DVSHGFRPQRSCHTALKTIKREFGGARWFVEGDIKGCIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENWQYHK-TYSGTPQ--GGILSPLLANIYLHELDKFVLQLKMKFDRE------S-----------------P----------ERITPEKYVRYADDFIISVKGSKEDCQWIKEQLKLFIHNKLKMELSEEKTLITHSS-QPARFLG | |||||||||||||
7 | 3kz4B | 0.14 | 0.12 | 0.87 | 1.09 | SPARKS-K | IQKMSQDLQLEQSETQ-FLTGICFKTLIAAMLSQRTM-SLDFVTT----NYMSLISGMWLLTVV--PNDMFIR----------ESLVACQLAIVNTIIYPAFGMPFQIQVANWLHRQVVVLNQVLNDNGHVINQLMEALMQLSRQQFPTMPYKRSIQRGILLLSNRLGQLVDLTRLLAYNYETLMACVTMNMQHVQTLTTEKLQ----------LTSVTSLCMLILFHYYNVNVNFHSNYNERINDAVAIITAANAIVEDFLKRLHIFD---------------VARVPDDQMYRLRDRLRLLPVEVRRLDIFNLILMNMDQIERASDKIA | |||||||||||||
8 | 2pffB | 0.16 | 0.15 | 0.91 | 1.34 | HHsearch | MDAYST--RPLTLSHGSLEHVLLVPTASFFIASQLQENKILPTEGFAADDETPAELVGKFLGYVS--SLVEPSKGQFDQNCYLEGIHALAAKLLQENDTTLV---KTKELIKNYTARIMAKRFDKKSNSALFRAVGEGNAQLVAIFGGTDDYFEELRDLYQTYAHYVVTAKLLGFTPGELRSYLKGATGH---------------SQGLVTAVAIDSWESFFVSVRKAIYAYPNTSPPSILEDSLENNEGVSISNLQVNKTNSHLPAGKQVEISLVNGAKNLVV--SGPPQSL-----YGLNLTLRKAKAPSGLDQSRIP-FSERKLKFSN | |||||||||||||
9 | 3kz4B1 | 0.13 | 0.11 | 0.88 | 1.06 | SPARKS-K | IQKMSQDLQLEQSETQF----LCFKTLIAAMLSQRTM-SLDFVTT----NYMSLISGMWLLTVV--PNDMFIR----------ESLVACQLAIVNTIIYPAFGMPFQIQVANWLHRQVVVLNQVLNDNGHVINQLMEALMQLSRQQFPTMPYKRSIQRGILLLSNRLGQLVDLTRLLAYNYETLMACVTMNMQHVQTLTTEKLQ----------LTSVTSLCMLIGNATVILFHYYNVNVNFHSNYNERINDAVAIITAANKKMKAIVEDFLLH--------IFVARVPDDQMYRLRDRLRLLPTVYSDLLAFVSADTVEPINAVAFDNMR | |||||||||||||
10 | 4zhjA | 0.07 | 0.05 | 0.72 | 0.67 | DEthreader | ----------------DPLAPCIG-------------------DDAHYVGMVELMAVI-VDAVVS---------QDHPRAIESLKL---YMCALPAIEPIILLQDREA---------------TPYSYNDNLIGTIPNLYYYAANSYLTPPALATLVNIASLAPMEEILLDITLATRAAVAALVQEQINADG-RVSFVSKPLFEYLEFCIRN--TLAAVQSAKVVVDRLLERQR---NGGNYPETIASDVVVNR-FSNSYSSNVNLA---------LDSSEIDV---------HGYEGVRELSASTFIDEECKMDNPNSFRRMVSTL---- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |