>PF01810 (192 residues) IFIVLVPGPNTLFVLKNSVSSGMKGGYLAACGVFIGDAVLMFLAWAGVATLIKTTPILFN IVRYLGAFYLLYLGIKILYATLKGKNSEAKSDEPQYGAIFKRALILSLTNPKAILFYVSF FVQFIDVNAPHTGISFFILAATLELVSFCYLSFLIISGAFVTQYIRTKKKLAKVGNSLIG LMFVGFAARLAT |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | IFIVLVPGPNTLFVLKNSVSSGMKGGYLAACGVFIGDAVLMFLAWAGVATLIKTTPILFNIVRYLGAFYLLYLGIKILYATLKGKNSEAKSDEPQYGAIFKRALILSLTNPKAILFYVSFFVQFIDVNAPHTGISFFILAATLELVSFCYLSFLIISGAFVTQYIRTKKKLAKVGNSLIGLMFVGFAARLAT | |||||||||||||||||||
1 | 6irsB | 0.09 | 0.08 | 0.91 | 1.00 | DEthreader | VGTIIGSGI-FVTPTGVLKAGSPGLALVVWAACGVFSIVGALCYAELGTTI-SK-SGGDYAL-ELIRPSSQYIVALVATPVPEEA------SGTKLDVNIVLALYSGL-FAYG-GWNYLNFVTEEMINPYR--NLPLAIIISL-PIVTLVYVLTNLAYFTTLSTEQMLS-SEAVAV-PVGLSCFGSVNGSLF | |||||||||||||
2 | 3hfxA | 0.05 | 0.05 | 0.92 | 1.00 | DEthreader | FASCTSAVFWGSIEIYYYISTAKELGLAYSLFHGPLPWATYSFLSVAFAYFFMEVIRPSTDNYLVALIFAMGTSLGLTP-HTL------------YRMLFYPWTVFYWAWVIYAIQMSIFLARISR--GRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIIINILIQYGVARAIIFLCFIATVTLVNACY | |||||||||||||
3 | 4o6yA | 0.08 | 0.08 | 0.95 | 1.04 | SPARKS-K | MVVRVLGFIIAALVLTWTVHYRNKDHIFNVHPVMMVIGLILFNGEAMLAYKSNLKKLVHLTLQLTAFILSLIGVWAALKFHIDKG---IENFYSLHSWLGLACLFLFAFQWAAGFVTYW------YPGGSSRASLMPWHVFLGISIYALALVTATTGILEKVTFLQVNQVIEAMLVNTMGVLILILGGFVIL | |||||||||||||
4 | 5vkvA | 0.13 | 0.12 | 0.94 | 1.91 | HHsearch | VLSFLSPLPLVPTYLFYLGGRPLFNALFFILGFGAVFFLLGLPFTLLGGLL----FEHRQTLARVGGVVLVLFGLYMLGLRP-RWGVSLEGETSRPLGAFLLGATLALGTPCIGPILGAILTLTA-V-GGG-V----GFLLAYILGLAVPFFVVALFADRIKGWLRRAGRISHYVEVLAGVVLVLVGVLLFT | |||||||||||||
5 | 3hfxA | 0.06 | 0.05 | 0.92 | 1.00 | DEthreader | MASCTAAVFWGSIEIYYYISNAKELGLAYSLFHGPLPWATYSFLSVAFAYFFRMVIRPSTDNYLVALIFAMGTSLGLTP--TL-----------MYRMLFYPWTVFYW-A-WWVIYAIQMSIFLARISRGRTVELCFGMVLGLTASTWILWTVLGSNTLLLIIIIPLIQYGVARAIIF-CFIATVTLVNACY | |||||||||||||
6 | 5m87A | 0.05 | 0.05 | 0.93 | 1.00 | DEthreader | GALVAVGYMDPGNWSTSITGGQYLLLSIIVISSLLAMLLQNMAAKLGIVCQLD-AQARA-GF-WITELAIMATDIAEVIGIIF------GGQTPLS-AS-LGIIGATI-MPHNLFLHSAISQSR-KIDRDKVAEAVRFSNWDSNIQLSLAMVVNALLLIMGVFKAVQDSFGLYAALLASGQNSTITGTITQL | |||||||||||||
7 | 5m87A | 0.06 | 0.06 | 0.95 | 1.00 | DEthreader | SGLVAVGY-MDPGNWSTSITGGQYLLLSIIVISSLLAMLLQNMAAKLGVCQLDLQAIRA-FFWILTELAIMATDIAEVIGIIF------IGGQTP-LSASLGIIGATI-MPHNLFLHSAISQSRKIDRTDSVAEAVRFSNWDSNIQLSLAMVVNALLLIMGVFLYALSNSTLFAVALLASGQNSTITGTIQL | |||||||||||||
8 | 2n4xA | 0.15 | 0.12 | 0.81 | 1.41 | HHsearch | LIFAGS-R------------GRALDAFLIVAGLTISMLILGYTASLF-----FG------FFRVVAMLFLLIFALILLSDELDEKVSSGLSWKIQTLPSFFFGMLLAFLLPAILPFAGIAISQTLLS--EN-P----LVMLSYGLGMAVTIAAVFKMGEK----FVK--ANFQLIRKVTGAIVLLYLAYFAL | |||||||||||||
9 | 6irsB | 0.07 | 0.07 | 0.91 | 1.00 | DEthreader | AGTIIGSG-IFVTPTGVLKAGSPGLALVVWAACGVFSIVGALCYAELGTTIS--KSGGDYAY-ELIRPSSQYIVALVFATVPEE------SGTKLDVGNIVLALYSGL-F-YG--GWNYLNFVTEEMINPY-RNLPLA-IIISLPIVTLVYVLTNLAYFTTLSTEQMLS--SEAVAVPVGLSCFGSVNGSLF | |||||||||||||
10 | 6li9B | 0.05 | 0.04 | 0.91 | 1.00 | DEthreader | VGTIIGSGI-FVSPKSVLSTEAVGPCLIIWAACGVLATLGALCFAELGTMI-TKSGGYP-SSL-VIKPTSFAIICLSSEKPPQIV------GAQLSVGAISLAFYNGL-WAYD--GWNQLNYITEE-LRNPY-RNLPLAIIIGIPLVTACYILMNVSYFTVMTATELLQ-SQAVAV-PVAFSTIGAANGTCF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |