Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MAFRGIVVLASALFVQSALSQCVGRAGPGLGGYRGGWDGFGYDGLGYDGAGYGWNGRLGCGGLGDDIAAASALGASHGGTLAVVTSSAAPTGLGIASENSYEGGVGICGNLPFLSTASIAGELRTGGTGGIDYGCGNGAVGITVESVISPAINYAPAGAPLGRSFNRGCGCGA |
1 | 5e7fG | 0.09 | 0.06 | 0.65 | 0.61 | DisCoVER | | --------DGDFTMKKFADSYVAFF------------------------------------------ANSGNTVTAPWDCTAEVELFY------HGWGYSGGEWEIGITTLTQIYEATGYTNGHDNQSMPTKAIYSGLKKGLYTFDIRDANGRGGGPKHPMMIVK--LY-RN- |
2 | 5y50A | 0.08 | 0.06 | 0.69 | 0.83 | DEthreader | | DGFLRETKKLSYIAGAMIAVNSMYVLQVISI----AGYATLNVTVLGMS-CSRAT-------GMGEFFRFGIPSASMICEESGASTRVAAVYTVIT------------G------VESMVIV------SVIFDALH-ALSGV---------------QDIGAYVNAGSQAVL- |
3 | 4o89A | 0.08 | 0.08 | 1.00 | 0.49 | CEthreader | | GQILRTSVALSTITGEPVRIVNIRANRPNPGLRPQHLHAILALKHLANAEVKGAHVGSRELVFIPKKLEAKEISIDIGTAGSITAMVFAREKVKFRITGGTDVSWSPPVDYIHGEIRVIRRGHYPKGGGIVEGYVEPEGISHATNSHVAERQARAAKDELLQLKVPIEIRTEI |
4 | 2h8oA | 0.09 | 0.08 | 0.90 | 0.53 | EigenThreader | | MTNFETRLRENAAKTEALLGHLLPQNLLEAMRHGVLNGCLHCYSLVHDDLVHRKFDEATAILAGDSLISLARAAGIGGMAGGQALDLAAEKKA---------------PGALLRFACEAGAIIAG--SNLRLFGEKIGLSFQLADDLLDLTKGTLVALRGEAWAREKLQEQVA |
5 | 3n9bA | 0.21 | 0.07 | 0.34 | 0.24 | HHpred | | ----------------------------------------------------------------------------LDGT---L-KSAVPKGP---CLDPAVKRLAVQVEDHPLDYADFEGSIPQAGDVIVWDR---GAWTPLD----------------------------- |
6 | 6bq1A | 0.38 | 0.12 | 0.31 | 0.68 | MRFsearch | | ----------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGMMQCVIAVA-------------------------------------------------------------------------------------------------- |
7 | 3rq4A | 0.14 | 0.14 | 0.97 | 0.31 | FFAS-3D | | VTARELCELATSLVLDPYLGFRTHKMNVSPVPPLRRQQHLRSALGGWTARYFQSRGPRQEAALKTHVYRYLRAFLPESGFTILPCTSMETNGAKIVSTRAWKKNEKLE---LLVGCIAELRESTRKRSAQINHDCDGNAACVKVLRDIEPGCFYGEGFFG---EKNEHCECHT |
8 | 6nyfA1 | 0.13 | 0.13 | 0.99 | 0.78 | SPARKS-K | | FPNKEYDLYKSLLSSKIDGGWDWGNAATHYWIKGGQWNKLEVDMKDAVGTYKLSGLRNFTGGDLDVNMQTLRLGQFNGNSFTYKDSADRTTRVDFNAKNLIDNFLEINNRVASSTVLTLQASEGITSSAEISLY-DGATLNLASNSVKLNGNVWMGRLQYVGAYLAPSYSTIN |
9 | 5ewqA | 0.10 | 0.06 | 0.63 | 0.83 | CNFpred | | --EGAFVLGKANMSEWANYLSMPSGYSGKKGQNLNPYGPIFDTSGSSSGSATVVAADFAPLAVGTETTGSIVAPAAQQSVVGLRPS------LGRVSR---TGIIPLAETLDTAGPMART----------------------------------------------------- |
10 | 6rj1A | 0.02 | 0.02 | 0.84 | 0.83 | DEthreader | | LVTTAQGSDRLIAAFKAG-----STTAGLDSDGGYKALVE-NTA-GLN-GPING---VTPVSGDGVTVFDALGPVPYYY--ADGFAN-----GTGLKAGVDPNYSAV-L-LVRGGVVRL-NFNPDTLLSFSYTFESVAVITVSRTGIEFNE--NTTT--LSQ-APAALA-VQN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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