Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | LVLVGLWVCATSLVVRGPTVSLVSNSFVDAGALGPDGVVEEDLLILGELRFVGDQVPHTTYYDGVVELWHYPMGHKCPRVVHVVTVTACPRRPAVAFALCRATDSTHSPAYPTLELNLAQQPLLRVRRATRDYAGVYVLRVWVGDAPNASLFVLGMA |
1 | 2giyA | 0.16 | 0.13 | 0.78 | 1.00 | DEthreader | | ----------------GVTVRMET--PEAILF-S----PGETFSTNVSIHA---IAHDDQTYSMDVVWLRFDVPPCAWSRLAVRSYAGCSRT----NPPPRCSEAHMEP-VPGLAWQA--ASNLEFRDASPQHSGLYLCVVYVN-DHIHAWGHITIS |
2 | 2giyA | 0.13 | 0.10 | 0.79 | 1.00 | DEthreader | | ----------------GVTVRMET--PEAILFS----PGE-TFSTNVSIHA-I--AHDDQTYSMDVVWLRFDVPCAAWSRLAVRSYAGCSRT---NPPPRCSAEAHMEPVPGLAWQAA---SVNLEFRASPQHSGLYLCVVYVN-DHIHAWGHITIY |
3 | 2giyA | 0.21 | 0.17 | 0.80 | 0.55 | HHpred | | -------------HVRGVTVRMETPEAILFS---PGETFSTNVSIHAIAH---D----DQTYSMDVVWLRFDVPTSCAEMRAVRSYAGCSRT--NPPPRCSAEAHMEPVPG--L-AWQAASVNLEFRDASPQHSGLYLCVVYVNDHIHAWGHIT--- |
4 | 5x5vA | 0.14 | 0.11 | 0.82 | 0.55 | DisCoVER | | --------TVPSPFVGP----A----DVYHTRPLEDPCGVVALISD--PQVDRLLNAVRPTYRAHVAWYRIA---DCAHLLYFIEYADC---DPRFGRCRRRTTPMWWTPSDYMFP-TEDELGLLMVAPGRFNEGQYRRLVSVD-GV-NILTDFMA- |
5 | 5x5vA | 0.16 | 0.10 | 0.59 | 0.45 | MRFsearch | | -------------------------------------------------------------YRAHVAWYRIA--DGCAHLLYFIEYADCDPR--QVFGRCRRRTPMWWTPSADYMFPTEDELGLLMVAPGRFNEGQYRRLVSVDGVNILTDFMVALP |
6 | 2giyA | 0.19 | 0.16 | 0.84 | 0.69 | SPARKS-K | | -------------HVRGVTVRMETPEAILFVSIHAIAHDDQTYSMDVVWLRFD--VPTSCAE---MRIYESPADAPCAASLAVRSYAGCSRTNP--PPRCS--AEAHMEPVPGL-AWQAASVNLEFRDASPQHSGLYLCVVYVND--HIHAWGHITI |
7 | 6jo7A | 0.13 | 0.11 | 0.90 | 0.53 | MAPalign | | -RVVHWDLSDRLLLSHDGNFSLLIRAVYTCNLHHHYCHLDESLAVAPALMTCINRAHVWTDAQQVVHWDRQLPGVSHADRLLDLYAS--------------GERRAYGFLRDRVSVNARGDFSLRIDELERADEGIYSCHLHHHYCGLHERRVFHLQ |
8 | 2giyA | 0.17 | 0.14 | 0.82 | 0.39 | CEthreader | | -------------HVRGVTVRMETPEAILF-------SPGETFSTNVSIHA---IAHDDQTYSMDVVWLRFDVPTSCASRLAVRSYAGCSRT-----NPPPRCSAEAHMEPVPGLAWQAASVNLEFRDASPQHSGLYLCVVYVNDHIHAWGHITIST |
9 | 5x5vA | 0.19 | 0.17 | 0.92 | 0.58 | MUSTER | | YPYTESWQLTLTTVFVGPADVYHTRPLEDVVALISDPQVDRLLN--------EAVAHRRPTYRAHVAWYRIADG--CAHLLYFIEYADCDPRQV--FGRCRRTTPMWWTPSADYMFPTEDELGLLMVAPGRFNEGQYRRLVSVDGVNILTDFMVALP |
10 | 2giyA | 0.20 | 0.17 | 0.82 | 0.69 | HHsearch | | -------------HVRGVTVRMETPEAILFS---P----GETFSTNVSIHAIAHD---DQTYSMDVVWLRFDVPTSCAEMR---IYESCSRLAVRSYAGCSRTAHMEPVP--GL-AWQAASVNLEFRDASPQHSGLYLCVVYVNDHIHAAQYRNAVV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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