Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MVLEVNRCENLCVACNSPVLVRDGALCVSQTLDYVKQKLVSDTFMGFAMACLLDCEDLVDSINLAPHVFAQRVFVFRPPNSYLLEMCVLSSMLENCETYTRRFVESLVSRARFIYSKSPCIDACFLLHSIEMMASTIIDYFKLDPEGAQPRYPGLMMYKLHGAIEDGSFESKGLLRPIYHESFKLCSDPDASFDEEEETGEAGVTFNVFYC |
1 | 1ksdA | 0.06 | 0.06 | 0.90 | 0.83 | DEthreader | | -----QVLRDSLFAQRSG-----QKVTRKDSALNDQTYF---DFVKFGMAATVLAWGLIDFEAYLDDGRKAVWAYGQVGAYKIDGDLAGETAAALAAILARQLFDFANNYRGKYSDSITDRNFYASAD-YRDELVWAAAWLNESLYDEFGLNWGGVSGVVAIMLEAAEARAQTQIDA---VC-PHHSTFNSP----DPNYHVLREVATDAG |
2 | 4kf7A | 0.05 | 0.05 | 0.87 | 1.00 | DEthreader | | -WRVAVSAFLRDGYV-H-QLL---REPTKTFANVAALVVRLLATLSRSAADALLAFLLHSRAPGTG--L-------FEVDWIRTALTEAIHAMSLFQLDA-VWFLMCEFF-EPV--PRGHELIAELLMPLHSLAMLGARLTQDLL--SEPVSCLLSILSGGSQ-WD----APSNEKSA-LDIYTRMLSD-DTLNVQYSQSRPFSMCILALV |
3 | 6lqnA | 0.35 | 0.33 | 0.95 | 6.42 | HHpred | | LVLEVNRHNAICVATNVPEFYARGDLNIRDLRAHVKARI-SSQFCGYVLVSLLDSEDQVDHLNIFPHVFSERI-LYKPNNVNL-E-CALLS-IENAKSPSIGLCREVLGRLTLLHSKCNNLDSLFLYNGARTLLSTLVKYHDLE---EGPWNEGLSLFKLHKELKRAPSEARDL-QSLFLTSGKGCLA-RSPKDNKEEDANSGFTFNLFYQ |
4 | 6t5aE | 0.19 | 0.17 | 0.90 | 2.03 | DisCoVER | | LLACEVRQQPRFTATIARVDVPGCRLRFVLDGAYVTSECGQSSYRGFAVAVLTANEDHVHSLAVPPLVLLHRFSLFNPRDLLDFELACLLMYLENCPRATPSTFAKVLAWLGVAGRTSFERVRCLFLRSCHWVLNTLMFMVHVKPFDVLPHWAYNPAGIMG-------S-CWASEEVRAP--LVYWW-----------LSETPKRQTSLF- |
5 | 6lqnA | 0.30 | 0.29 | 0.95 | 1.85 | MRFsearch | | -VLEVNRHNAICVATNVPEFYNRGDLNIRDLRAHVKARIS-SQFCGYVLVSLLDSEDQVDHLNIFPHVFSERILYK----PNNVNLECALLSIENAKSPSIGLCREVLGRLTLLHSKCNNLDSLFLYNGARTLLSTLVKYHDLE---EGPWNEGLSLFKLHKELKRAPSEAR-DLQSLFLTSGKGCLARSPKDYNKEEDANSGFTFNLFYQ |
6 | 6lqnA | 0.33 | 0.32 | 0.95 | 2.04 | SPARKS-K | | LVLEVNRHNAICVATNVPEFYNRGDLNIRDLRAHVKARI-SSQFCGYVLVSLLDSEDQVDHLNIFPHVFSERI-LYKPNNVNLE--CALLS-IENAKSPSIGLCREVLGRLTLLHSKCNNLDSLFLYNGARTLLSTLVKYHDLEEG---PWNEGLSLFKLHKELKRAPSEARDL-QSLFLTSGKG-CLARSADLNKEEDANSGFTFNLFYQ |
7 | 6t5aE | 0.17 | 0.17 | 0.96 | 0.89 | MAPalign | | LACEVRQDRQPRFTATSIARVDRLRFVLDTSEDYFKRCCGQSSYRGFAVAVLTANEDHVHSLAVPPLVLLHRFSLFNPRDLLDFELACLLMYLENCPRATPSTFAKVLAWLGVAGRRTFERVRCLFLRSCHWVLNTLMFMVHVKP---FDDEFVLPHWYMARYLL--ANNPPPVLSALF--CCVAYNPAGIMGSCWASEEVRAPLVYWWL- |
8 | 6t5aE | 0.17 | 0.16 | 0.97 | 1.18 | CEthreader | | LACEVRQVGDRQPRFTATSIARVPEDAYVTSEDYFKRCCGQSSYRGFAVAVLTANEDHVHSLAVPPLVLLHRFSLFNPRDLLDFELACLLMYLENCPHATPSTFAKVLAWLGVAGRRTSERVRCLFLRSCHWVLNTLMFMVHVKPFDDEFV---LPHWYMARYLLA--NNPPPVLSALFCC--VAYNPAGIMGSCWASEEVRAPLVYWWLS |
9 | 4ag5A | 0.10 | 0.09 | 0.92 | 0.44 | MUSTER | | IVLGKDRDGGLVLVWKRGGDRTNSNWTI--AKMLLLREYMQG-----SRVIIIDPEREYKEM---CRKLGGVWINCTGGEGK-------INPLQVRLRVFQSPLALHIQTLRTFFSLYLRDLTDTEKAALEDALVEVYKEAGITWDTDVPNDKWPTVKELYEYCVKKAEENPETYGRLSVLLKRAAEGADSYLWAGPTAVEADSDFIVFDV |
10 | 6lqnA | 0.35 | 0.33 | 0.96 | 7.27 | HHsearch | | LVLEVNRHNAICVATNVPEFYARGDLNIRDLRAHVKARI-SSQFCGYVLVSLLDSEDQVDHLNIFPHVFSERI-LYKPNNVNL-E-CALLS-IENAKSPSIGLCREVLGRLTLLHSKCNNLDSLFLYNGARTLLSTLVKYHDLE---EGPWNEGLSLFKLHKELKRAPSEARDL-QSLFLTSGKGCLARSPCADNKEEDANSGFTFNLFYQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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