Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | RLPTKRKLAGQKAHLEMYRKLAKYSSVGHLLKFLAIDHPCPTRCQLKIFFEVCLGNRIADCVILLSCGETRLCYIIELKTCMSDSPSMYNETRLCQRSQGLCQLSDALRFISFNAPAGRQKWHLVPHLIFKSQRGLKTIYTETPQFPTNIIHSSPDKLASFFFSRADREVSE |
1 | 2wj0A | 0.09 | 0.05 | 0.56 | 0.71 | DisCoVER | | -------------GTRF---------------ERDLLELWKAGFAAIRVAGSGVS-PFPCPDIVAGNG--RTYLAIEVKMRKE------------LPLYLADEVEQLVTFARG--------FGAEAYVALKLPRKK-WRFFPVIAV--------AG---------------- |
2 | 4fc5A | 0.09 | 0.06 | 0.72 | 0.67 | DEthreader | | ----GN-RGVLKVYLDYRKNNFHNSTK-MFLD--NLERV------LIVTGFPIPPM-ETDGPALYREMLGF--ISVETPGR---A------G-FLKARA-PTIGV-G--D-----------------EIMRVVGHVPGIASVVETDELLQSNLLEG-WDERRVIEAISIDGK |
3 | 5zytA | 0.10 | 0.09 | 0.90 | 0.85 | CEthreader | | EYTSNVFLQGKRFHEALESILSPN---LLKSGYIESVQHILKDVSGVRALESAVQHELLDCVAEYQG----KLCVIDWKTSEKPKPFIQSTFD------NPLQVVAYMGAMNHDTNYSFQV--QCGLIVVAYKDGSPAHPHFMDAELCSQYWTKWLLRLEEYTEKKKNQ--- |
4 | 6de6A1 | 0.04 | 0.03 | 0.91 | 0.60 | EigenThreader | | NKYDILFE-----------PCNGGGYRDPSAAAAMRGIKSEGGWGVIFTEQTEMHHTSIELRLMKVHGALAGIQLAYSGAPSALPIRTFTNDPVQDIKNLRRWFVNAAKRSKIA-----GFDLICLYGATNQRTDEYGMRVSLNLPDLWDLAQGTWEDCSEILVKGIRELSS |
5 | 4dapA | 0.15 | 0.11 | 0.72 | 0.50 | HHpred | | ----------TLWANRLTKEAIL-----------NESISELSGY-SSLKSEVKYGASRIDFMLQA--DSRPDCY-IEVKSVTLAENEPDAVTER-----GQKHLRELMSVAAE----GQ-----RAVIFFAVLHSA------ITRFSPA--RHIDEKYAQLLSEAQQRGVE- |
6 | 5zytA | 0.11 | 0.09 | 0.81 | 0.73 | MRFsearch | | ---SNVFLQGKRFHEALESILSKSGYIESVQHILKD-------VSGVRALESAVQLNYIGLLDCVAEY-QGKLCVIDWKTSEK------PKPFIQSTFDNPLQVVAYMGAMNHDTN---YSFQVQCGLIVVAYKD---------GSPAHPHFMDAELCSQYWTKWLLR---- |
7 | 5zytA | 0.12 | 0.10 | 0.87 | 0.70 | FFAS-3D | | EYTSNVFLQGKRFHEALESILLKSGYIESVQHIL-------KDVSGVRALESAVQHETLDCVAEY----QGKLCVIDWKTSEKPKPF------IQSTFDNPLQVVAYMGAMNHDTNYSFQV--QCGLIVVAYKDGSPAHPHF---MDAELCSQYWTKWLLRLEEYTEKKKNQ |
8 | 3s1sA1 | 0.15 | 0.12 | 0.83 | 0.72 | SPARKS-K | | YLPSYEVSVYHPICEAALNQALVNTGL---------------DSTYEVVHHELVGSIEADFVIKNK-QTKKYLLIVEVK-----------RTKSQVSTRYRLQAQSYVREANIKV---EQHYYCLTIIDFFKHDPNKPQIIEPSPIVVGNFSDTYNRLVEAFQNIIDISVND |
9 | 3s1sA | 0.13 | 0.10 | 0.81 | 0.78 | CNFpred | | --------DEVSVYHPICEAALN-----QALVNTGL------DSTYEVVHHELVGSIEADFVIKNKQ-TKKYLLIVEVKRTK----------SQVSSTRYRLQAQSYVREANIKV---EQHYYCLTIDFFKHDPNKPVVSQQIIEPSPIVVGNFYNRLVEAFQNIIDISVND |
10 | 1w36E2 | 0.10 | 0.08 | 0.78 | 1.00 | DEthreader | | RGHAAGASPGTFLHSLFED--LDFTQ--TVLQAPLNETGV---QLSNKQVEMEFLKGFIDLVFRHE----GRYYLLDYKSNWLGEAAMAAMQAHRYDLQYQLYTLALHRYLRHRIADYD-EHHFGGVIYLFL---RGVQGIYTTRPNAG----------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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