Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MYNEDQTLFSRTLAAVMDNIAYLCSGTHQGWNESSWQEIVVVVVSDGAAQVNHDTLHVLSIMGIYNHGIPHASVNGVPTRAHLFEFTTQVRVDRHLNAHFSGSQPQTFLDRPAMPMQMIFLLKEKNAKKINSHRWFFNAVCEELDPEVCILVDVGTKPSRKSFYHLYRAF |
1 | 3sigA | 0.12 | 0.09 | 0.78 | 0.83 | DEthreader | | ------R--A---ETTLAAARRLTG-----AA-G--DQVACLNFA-SAEHPGGGFLSELARSGLYARAVPQFAFHRQRYSDHLIYSPVPVFRDDAGRLL----------EE-PYRVAFLTSPA-PNRRIGLRRAAKVLAAARHHGHRRLVLGWGGVAVWD-H--FA-RF- |
2 | 5e3bA | 0.06 | 0.04 | 0.74 | 0.57 | CEthreader | | ---------------------EISYVRGDATAPSVKGVKMIAHVCNDLGGWVLAVSRRWPQPEAAYRAWHRDRAANDFGLGAVQFVQVEP------------------------YVWVANMIGQVRYEAIGTALGRVADRAAELEASVHLPRIGLAGGTWSRVEPLISDR |
3 | 4p7hA1 | 0.05 | 0.05 | 1.00 | 0.67 | EigenThreader | | TFLHEPAVLYNLKDRYGSEVVAAYRGKKRSEAPPHDRENQSILITGEKTVNTKRVIQYFAVIAAIGDPGKGAKTVRNDNSSRKFIRIHFGANMKFKLKQEQAEPDGTEEKQPRQYFIGVLDIAGGMDLQACIDLTFKAKLFDNHLGAHFSLIHYAGIIGWLQKNKDTVVG |
4 | 6wlbA | 0.15 | 0.13 | 0.85 | 0.45 | HHpred | | TVDEPPLITANTVLSILAV------D-------YPVDKVSCYVSDDGAAMLTFESLVFCKKFSIEPPSAMKVRVNGNNTRDHP--GMIQVFLGNTGA-----------RDIEGNELPRLVYVSREKRPGYQHKAGAENALVRVTNAPYILNLDCDHVNNSKAVREAMCIL |
5 | 4hg6A | 0.24 | 0.14 | 0.58 | 0.48 | MRFsearch | | -YNEPADMLSVTLAAAKNMI-------------YPARLRTVVLCDDGGTERRRELQQLCREL------------------------------------------------------GVVYSTRERNE---HAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYF |
6 | 2o1uA1 | 0.09 | 0.08 | 0.84 | 0.53 | FFAS-3D | | LYKNKEIFLRELISNASDALDKIRLIDENALAGNEELTVLLHVTDTGVGMTREELVKNLGTVGFYS----------AFLVADKVIVTSKHNNDTESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTILVKKYSQFINFPIYVWSS----------------- |
7 | 6u4bA2 | 0.09 | 0.06 | 0.69 | 0.56 | SPARKS-K | | AVPVVISFDDNYAISGGALINSIIRHADKN------KNYDIVVLENK---VSYLNKTRLVNL-----------TSAHP-----NVSLRFFDVNAFTEIVHTRAHFSAST--------------------------YARLFIPQLFRRYVVFIDSDTVVKAD-LGELLDVP |
8 | 4xarA | 0.08 | 0.06 | 0.69 | 0.68 | CNFpred | | -----DFYQAKAMAEILRFF--------------NWTYVSTVASEGDGETGIEAFEQEARLRNI------------------SIATAEKVGRSNIRKSYDSVIRELL-----KPNARVVVLFMR-----SDDSRELIAAASRA-NASFTWVASDGWG----AQESIIKGS |
9 | 6wlbA | 0.11 | 0.08 | 0.78 | 1.00 | DEthreader | | STDEPPLITANTVLSILAV--DYP-----------VDKVSCYVSDDGAALTFESLVETAEFAR---QDTWPGN--RDHP-GMIQVFGARDIE-------------------GNELPRLVYVSREKHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNSKAVREAMCLN |
10 | 6f72A | 0.10 | 0.09 | 0.91 | 0.46 | MUSTER | | DSAVGNEVYWEAVAAFHALLPDFLDGGNSFTYSVGNNSLTAYGTMPGADR--DAVDRLLRPF------LDDLASRGITPVVQPRVSTN-------YDHFFTYLGPAPYGNAAYFPFTNSRIIPRSLVTDPKSNAVVTDLFRNISQVPYCDSFSVAKPHPANSLHPAWRTL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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