Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | VGIDIAKNKHDVTALNVPGKTVLKPLTFSNNKAGFELLDLSLRQLNQDCLIALEDTGHYAFNLLNFLHEQGYKVYTYTPLLIKEFAKSLSLRKTKTDKKDAHGIALKLLSDPNREQFQHDNRQVELKILARHIHRLKRKQSDWKVQYTRCLDIIFP |
1 | 5c0wK | 0.06 | 0.05 | 0.89 | 1.00 | DEthreader | | IAVDLEHCLMQIST-------RERDYLVDTRENLHI-LNEVFT--NPSIVKVFHGAFMNIIWLQGLYV--VGLFDTYHRHSLAYLLENANFKTSAYARADTHFLLNIYDQLRLLVLSNVRRSSEV-YSP-IEKESPWKILMYVRAALVAYT-PT-- |
2 | 5c0wK | 0.07 | 0.06 | 0.89 | 1.00 | DEthreader | | IAVDLEHCLMQIST------RERDYLVDTLLRENLHILNE-VF-TNPSIVKVFHGAFMNIIWLQGLYV---VGLFDTYRHSLAYLLENFANFKTAYARADTHFLLNIYDQLRLVLSRAKRRFSSEVYS--PIE-KESPWKILMYYNIPPER-AY-- |
3 | 3cg7A | 0.10 | 0.09 | 0.93 | 1.17 | DEthreader | | LILDFETIQFAIVAYDVNKREDISFNKYVTFDVVYEQFQQWLITLLEKFAFVCDSQDRIAQYQ-QMP-AFFRQYINLYTTNIGKMNEDLPTI-RADAMDDCLNIATILQMIAVTVNELLTCCA--SWRRQ--PLV-YNKEWRIDPIHFAKI-AG-- |
4 | 4ep4A | 0.18 | 0.13 | 0.74 | 1.00 | DEthreader | | AGIDPGITHLGLGVVAVEKARLLHGEVVKRVGRIHARVLEVLHRF-RPEAVAVEEQAGALGAVLVAAFEAGVPVYAYGPMQVKQALAGHAAKEEASHLADALAIALTHAFYATAKPL--------------------------------------- |
5 | 6gmhM | 0.11 | 0.10 | 0.87 | 1.00 | DEthreader | | LGIAFSSRHVFCALVNGEGEVTDFLRLPHFTKQDIETLKKFLLNKK-PHVVTVAGENRDAQMLIEDVKRVHIGVELVDNELAILYMNSKKSE--PPVLRQAVSLARRIQDPTAYRSPNT-------VTFDIFSA-DL--TC-RTS-LM------GG |
6 | 6is8A | 0.17 | 0.13 | 0.81 | 0.40 | HHpred | | IGVNPDIGGAIAVL-SPDGQVFDPFVHIRLDTKSIIQLLRGLDA-PPGTTAYIEKSSPFPTLWIASLVASGFSVVPIASQTWKAY---FGLMRSETPKDDSRQAASILFPDKDQLKLKHHGRAEAL-LLAAY------------------------ |
7 | 4ep4A | 0.20 | 0.15 | 0.72 | 0.62 | DisCoVER | | AGIDPGITHLGLGVVAVEGARLLHGEVVKTVGRIHARVLEVLHRF-RPEAVAVEEQVWALGAVLVAAFEAGVPVYAYGPMQVKQALAGVALMVRPSHLADALAIALTHAF-YAK-P---------------------------------------- |
8 | 1hjrA | 0.12 | 0.10 | 0.86 | 0.52 | MRFsearch | | LGIDPGSRVTGYGVIRQRQLSYLGSGCIRTLPSRLKLIYAGVTEIIQPDYFAIEQVFQARGVAIVAAVNQELPVFEYAARQVKQTVVGI-------GSAEKSQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQ--------------- |
9 | 3bzkA3 | 0.12 | 0.10 | 0.79 | 0.65 | SPARKS-K | | LGLDPGLTGVKVAVVDATGK-LLDTATVNQWDQTLAVLAALCAKHQVELIAIGNGTASETDKLAGELIKKKLTKIMVSEAGASVYSLAAKEFPELDSLRGAVSIARRLQDPLAELVKIEPKSIGV------------------------------- |
10 | 3bzkA | 0.12 | 0.12 | 0.98 | 0.89 | MAPalign | | LGLDPGLRGVKVAVVDATGKLLD-TATVPHWDQTLAVLAALCAKHQ-VELIAIGNGT-ASRETDKLAGEMKLTKIMVSEAGASVYSELAEFPELDVSLRGAVSIARRLQIGVGQYQHDVSQLKLARSLDAVVEDCVNAGLSTLAQNIVAHRDANGA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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