>PF01526 (384 residues) EILDEVNCWTTFTRHFSHIKNDITRPDTRQLLTTILADGINLGLTKMAEACPGSTKSSLE DIQAWYTRDETYSAALAELVNAQGKRPLAAFWGDGTTSSSDGQNFRTGSSGRYAGQVNPK YGQEPGRQFYTHISDQYSPFYTCIISRVRDSTHVLDGLLYHESDLEIREHYTDTAGFTDH VFALMHLLGFAFCPRIRDLHDKKLFIKGKADQYPALQSLISTTSLNLKEIEIHWREVLRL ATSIKQGTVTASLMLKKLASYPKQNGLAKALREIGRIERTLFMLDWFRDPALRRRVQAGL NKGEARNALARAVFLHRLGEIRDRKPENQSYRASGLTLLTAAISLWNTIYMERAVDALKR KGMKINERLLSHLSPLGWEHINLT |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | EILDEVNCWTTFTRHFSHIKNDITRPDTRQLLTTILADGINLGLTKMAEACPGSTKSSLEDIQAWYTRDETYSAALAELVNAQGKRPLAAFWGDGTTSSSDGQNFRTGSSGRYAGQVNPKYGQEPGRQFYTHISDQYSPFYTCIISRVRDSTHVLDGLLYHESDLEIREHYTDTAGFTDHVFALMHLLGFAFCPRIRDLHDKKLFIKGKADQYPALQSLISTTSLNLKEIEIHWREVLRLATSIKQGTVTASLMLKKLASYPKQNGLAKALREIGRIERTLFMLDWFRDPALRRRVQAGLNKGEARNALARAVFLHRLGEIRDRKPENQSYRASGLTLLTAAISLWNTIYMERAVDALKRKGMKINERLLSHLSPLGWEHINLT | |||||||||||||||||||
1 | 3gmiA | 0.07 | 0.04 | 0.61 | 0.67 | DisCoVER | -------------AMLIGEIMDLNLKNFLEDREEIIRDA--------------------------------KR-KDEKSFKDFIVEEIKEREKDKIVCDFTEYNPLHKKLERSGRGIP------YFLNRRAAIADIVVEGPPMG-IMGSG-QYMRCLI-KMFYSLGAEIIPRG-----YI--PEKTMEKVIDCIN-----KGYHIQVKPYKII-----CIETEILGE------------KL-----------------------------NIDNIASMSQMIYKLNREGLKFN-PKF-VFVKRLESGTKIREAIMLPTTLLKRHERILSKLEAKYINNYPAK-IK--I-------------------------LAV-------- | |||||||||||||
2 | 3ecpA | 0.07 | 0.06 | 0.79 | 1.00 | DEthreader | -ALHRAADWAKSVFSSALDPRRTAR--VNVAAQLAKY-SG-KSITISS--E--GSKAAQEGAYRFINVSAAIRKAGAMQTVKLAQE---F---PELLAIEDTTSLSYRAEEL-GK-LGSI-DKSRGWWVHSVLLLTVGLLHQEWWRESGKWLAAAATSRLRMGSMMNVIAVCDREADIHAYLQDKLAHNERFVVRS-K---HPRKDVESGL-YLYDHLKN-------------------------------------------------TLKQGNITLNAVLLLLTVLALRVIDIYTH-RWRIEEFHKAWKTGAGA-ERQRMEEP-DNLERMVSILSFVAVRLLQLRESFTPSAETVEKAGSLQW------TGIASWGALWEE- | |||||||||||||
3 | 6ozhA | 0.12 | 0.07 | 0.57 | 0.62 | CEthreader | ---------------------------------------------------------------ITDEQIAEWNSKQEELRDKIIRSDGDFSLSKVKYVGGFDVSYSKINHE------------LAVSCMVVLSYPEMKQVYMNTTKVIEPFQQELQLLKAKKPNLEPQVFLLDGNGFFHAASHLGVLSNTRTIGVAKSL-------------------------IEIPEDGVKKTEVISQFKRLRKTGGNELDIIS----TEKNEVLAKAVLYAPKVEKPIFVGHKCSLETAAKIVKGCTKRIPEPIKMADKWSRKELKKIE-------------------------------------------------------------- | |||||||||||||
4 | 6p5aA | 0.09 | 0.07 | 0.79 | 0.67 | EigenThreader | ESQQLEESLRKIFIRILKNGGQRATFNSDDISTAICLHT--AGPRAYNHLYPLPSRTTLYRWLSDVDIKDVVIDLM---------DDA-----DKLCVLAFDE-MKVAAAFEYDSSADP---SDYVQLAIVRGLSWKQPVTRM--DPDTLNNILRKLHRKG---YLVVAIVSDLGLWTELDTPHLI---KLVRNHYVDSGLGKKLTKKTIQEALHLCNSLGYDIENATETADFFKLMNDWFDIFNSKQPYG---------KQLDIQNDILNRMSEIMGIIVNNASLDGLYKYLQENFLNQDIVEHFFGSMRSR----GGQFDHPTPLQFKYRLRKYIIAR--------------------------------------NTEMLR | |||||||||||||
5 | 1x5bA | 0.11 | 0.04 | 0.38 | 0.29 | HHpred | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSGMPLFT--A-NPFEQD---VEK-ATNEYNTTEDWSLIMDICDKVGSTPNGAKAIMKRVNH-KVPHVALQALTLLGACVANCIFHLEVCSRDFATEVRA-------------VIK-N------KA---HPKVCEKLKSLMV----EWSEELISATIKSMKEEGITFPPAGSQTSGPSSG------ | |||||||||||||
6 | 1w63C2 | 0.12 | 0.07 | 0.62 | 0.53 | MRFsearch | --VLAINILGRFLLN--------NDKNIRYVALTSLLKTVQTDHNAVQRHRSVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSC------------------------------------------------------------EPEFKADCASGIFLA-----AEKYAPSKRWHIDTIMRVLTTA-------------------------------------GSYVRDDAVPNLIQLITNVEMHAYTVQRLYKAILGDYSQQPLVWCIGEYGDLLVLDILESVLITSVTRGYALTAIMKLSTVNRIKKVVSIY----GSSIDVELQQRAVEYNALFK------KYDHMRSALLERM------------------------- | |||||||||||||
7 | 5frpA2 | 0.09 | 0.07 | 0.76 | 0.70 | FFAS-3D | ELNQALAKTF--------------IDSDPRVRRTSVMIFNKVPVTEIWKNI--TNKAIYTSLLHLARHKEVRELCINTMAKFYS-----NSLNEIERTYQN-------------KEIWEIIDT--------------------------IPSTLYNLYYIND---------------LNINEQVDSVIFEYLLPFEPDNDKRTVLSHFDKKAFTSFFAFNA----RQIKISFAISKYIDFSKFLNNQESQGPIVMNKYNQ--TLQWLASGLSDSTKAIDALETIKQFNDERIFYLLNACVTFKNCYNELVSKL--------QTPSIMPRDIAKVIQILLFRASIIYNVSNISVLLNLSNNSDAKQLDDDISKVNPTLFK----- | |||||||||||||
8 | 4fyeA | 0.11 | 0.09 | 0.86 | 0.73 | SPARKS-K | HDSFSGPGARMPYSDFKGADD----YKKLAIKAVTLINQEEVIQTLAQRQIDRMTNEDLWNK----IPEEYREKARAQLIKLYVEHPL------------------------------------SVTECYTQV----VTAGQRVAANQKEQFEYVRQMMDAGSKAKITIQTGSSWGVNNQNARFVNQMTDDVIRNLDKVAQN----LGDYDKAGALHTLLKGPDVSKEVKGAYREALFSYFEEYQKGEAKLDQLKNQVDGYEKSIAIYELHNQIDALRKAYYTEHKGQLQELKEQISPVISRLQHFYNSCAYLTQAENTWHHGKNKLQTLMASLSCELRLAQKIVGNALWTAEFLDHRRTHGKEVSEQLDRELTTIALHHTANT | |||||||||||||
9 | 4gmxC | 0.09 | 0.08 | 0.95 | 0.88 | CNFpred | SEDTEKRFVVTVIKDLLDLCVKKRGKDNKAVVASDIMYVVG-QYPRFLKAHWNFLRTVILKLFEFMHEEGVQDMACDTFIKIVQKYHFVIQQP-------RESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEERSVA-ERNRLLSDLMQLPNMAW-LLDSETVKI-IANIIKTNVAVCTSMGADFYPQLGHIYMLQLYRAV----SSMISAQVA---PKVRGLRTIKKEILKLVETYISK-PLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGIPQGVILQSVFECTLDMINKRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHVEVNGLQIALDLVKNIERMGVPFANEFHKNYFFIFVSETFFV | |||||||||||||
10 | 3ecpA | 0.06 | 0.05 | 0.81 | 1.00 | DEthreader | ALHRAADWAKSVFSSAALGDPRRTARLVNVAAQLAKY-SG-KSITISS-EGSKAAQEGAYRFIRNNVSAEAIRKAGAMQTVKLAQE---F---PELLAIEDTTSLSYRHAEELGKLGS--IQDSRGWWVHSVLLLRTGLLHQEWWMREKESGKWLAAAATSRMGMMNVIAVCDREADIHAYLQDKLAHNERFVVRS--K--HPRKDVESGLYLYDHLKNQ-------------------------------------------------TLKQGNITLNAVLLLTVELALRVIDIYTH-RWRIEEFHKAWKTGAG-AERQRMEEP-DNLERMVSILSFVAVRLLQLRESFTPSQSAETVKAGSLQ-------GIASWGALWEWE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |