>PF01525 (212 residues) MSDFGINLDAICDNVKKSQTESRTGSQLSNRSSRRMDFVDDEELSTYFNSKASVTQSDSC SNDLAMKHSIITEAVVCDESAHVSADAIQEKDETVPQIDHRIMKWMLDSHDGVSLNGGIN FTKAKSKVKETENEITEMKSKTNLLVNASVGINSNIGAFNPINHKVKMEAVSDMFEDEDI EGCICKNCPYREKYRKLRSRMKNVLIDMINEM |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MSDFGINLDAICDNVKKSQTESRTGSQLSNRSSRRMDFVDDEELSTYFNSKASVTQSDSCSNDLAMKHSIITEAVVCDESAHVSADAIQEKDETVPQIDHRIMKWMLDSHDGVSLNGGINFTKAKSKVKETENEITEMKSKTNLLVNASVGINSNIGAFNPINHKVKMEAVSDMFEDEDIEGCICKNCPYREKYRKLRSRMKNVLIDMINEM | |||||||||||||||||||
1 | 2p51A | 0.06 | 0.04 | 0.67 | 0.64 | DisCoVER | RYPVVSMDT-EFPGVVARPDDYHYQTLRANVDSLKIIQI----G--LAL----SDEEGNAPACTWQFNFTF---------NL--------------QDDM--Y--------APESILTSGIFHQEV--------GI-------EPADFAELL-IGSGLVLQEEVTWITFHLKAMTQ-IPL--PAEYGPQH---Q--AGSDALLTARIFFLN- | |||||||||||||
2 | 5o31L | 0.05 | 0.04 | 0.79 | 0.83 | DEthreader | LYKAISAFTS------SNWHWL----LSLSF-KMDYFSMFIPVALFVTWSIMSFLLLFLITMLLV--WEVGIMSINRGDIGFILA-M---------TWDLQ-IFDSNMPLIGLAAKTMVAGIL---YI-SITLCLGAITTLFTAMCALTQ--NDIKKII------A-FSTSSQLGLM--MVTIGIN-QP-YLAFLHICTHAFFKAM-FMG-- | |||||||||||||
3 | 1vt4I3 | 0.04 | 0.04 | 1.00 | 0.66 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 5htjA | 0.05 | 0.04 | 0.91 | 0.57 | EigenThreader | QVWREALWQLLTQIPLLYNQACPIWVPADHAALSSLAKLWFWQQQFADWLSLQLHGCSHNALKLGYSPVVHEPGVGPILDCQICAGIAAFLASGAHQPGEAVT--SLGSTIVLKLLSQVTGGASNCGGATLRQFLQGLLEGLTQVETLGYQRLQDLGATPLKRIWTAGQLRQQAIGVPPNTEAAFGTARLAAFGS----------------- | |||||||||||||
5 | 5oa9A | 0.07 | 0.02 | 0.27 | 0.34 | HHpred | LEAYGLDPYSVAAILQQRCQASTTVNPAPGAKDSLQVQIQVHHLGWLLLEEYQLPRK----------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5u1sA | 0.10 | 0.06 | 0.60 | 0.50 | MRFsearch | ----PLLFDKVLNNIDN---------KNYREFNNISTITESIRVSAAQKDLME----------SNLNINVITIDFCPIT-------------------------------GNLLLSKRTHLRLPLISFPEATKKLLSIINESNQTTSVEVT-------------------------------NKIKTREERKSWWTTRYDLDKRMQQLLNNI | |||||||||||||
7 | 6bx3F | 0.14 | 0.12 | 0.85 | 0.37 | FFAS-3D | -------VNDIWSRLKTDEDRAVVKKMVEQTG-------HIDKFKK-FGQLDFIDNNIVVKTDDEKE----------------IFDQIVVRDMTLKTLEDDLQEVQEISLPLFKKKLELEVYLGWLDNVYTEMRKLDDDAASHVECGKEDNICGYCSTYERIPCSVE-EFVRDFGSNEEATKEVCWKCQYLQQIDSLESMQKQLNIQYYEEI | |||||||||||||
8 | 6v8pA | 0.10 | 0.10 | 0.98 | 0.74 | SPARKS-K | TADFNLFCSWIVDRCYFRSPVLNSILDIDKLTIND----DLQLLLDRFCDFKCNVLSRRRVGNGLIEIDILPQFIKNREKLQHRHDFLEKLVKPYVSSARDMINELTMQREELSLKEYKE-PPETKRHVHQWQSSGEFEAFYKKAQHKTSTNFENFIDKNQKFSAINTEALPQLWPRLPGLRYGKRAFVYQDILNKLEDEGFPKIDYKDPFF | |||||||||||||
9 | 1g71A | 0.08 | 0.03 | 0.41 | 0.31 | CNFpred | ---------------------------------RKNQYSDIRDLEDYIRAT--------------SPYAVYSSVAFYEN-----PREMEGW-----------------------RGAELVFDIDAK----------------------------------------DLPLK----------RCNHEPGTVCPICLEDAKELAKDTLIILREE | |||||||||||||
10 | 6uebA | 0.07 | 0.06 | 0.87 | 0.83 | DEthreader | FEIPEPRFLRSIDL-GGLPD-ED-------------SWNLRLYFVITEKLLANYILPLFLTVFL-FSRTHEFFQKAWIYLQIWNGQD-------G--GLEGLRQWQGDN-YGKKRRVTVSILDMSGSESFHPSEMLGPRVSTDTSLREPRGF-SRKVGSEWVCSRYKLDEVFKTYGTMLVNPNYL-TSSTLREMSLVLFNSSPSEMQAYTAT | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |