>PF01309 (196 residues) WWRGVHEVRVTDLFKDLQCDNLRAKDAFPSLGYALSIGQSRLSYMLQDWLLAAHRKEVMP SNIMPMPGLTPDCFDHLESSSYAPFINAYRQAILSQYPQELQLEAINCKLLAVVAPALYH NYHLANLTGPATWVVPTVGQLHYYASSSIFASSVEVLAAIILLFACIPLVTRVYISFTRL MSPSRRTSSGTLPRRK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | WWRGVHEVRVTDLFKDLQCDNLRAKDAFPSLGYALSIGQSRLSYMLQDWLLAAHRKEVMPSNIMPMPGLTPDCFDHLESSSYAPFINAYRQAILSQYPQELQLEAINCKLLAVVAPALYHNYHLANLTGPATWVVPTVGQLHYYASSSIFASSVEVLAAIILLFACIPLVTRVYISFTRLMSPSRRTSSGTLPRRK | |||||||||||||||||||
1 | 6kyvB | 0.06 | 0.05 | 0.82 | 0.57 | DisCoVER | NTIICAVVFFANQIYEQQKSVF-SKYFERHGYRVTGISI--LTPQILLMIFDECHPQVIGLTASVLCSLDASVIATVPKPV--PD-KEN--KK-------LL-CRKCKAATVCF--VSRPHPKPKQSFEKRAKIFCARHDWGIHVK-YKTFEI--PV--I------K--IESFVVED--IGVQTLYWKDFHFEK-- | |||||||||||||
2 | 3c02A | 0.09 | 0.07 | 0.79 | 0.83 | DEthreader | VREFIGFLGTFVLMF-LGEG-ATANFH-GDWYKLCLGWGLAVFFGILVSAKLSG---AH------N--L--AVSIGLSSNFKIVYFFAQLLGAFVGSYIIQFAWETSNEILTGILLLVILVVVDENICGKFKLVVGLIIL-----------------------ALN-PSRDLGSRFLSLIYGKDTFTDNFYFWLV- | |||||||||||||
3 | 5d06A | 0.07 | 0.07 | 0.99 | 0.43 | CEthreader | AIKATEKLSLESINYVLYRAEQEEYDYSEGRSGAYDIKPVYCGLQGWVSILRKIIFYAVDYVVNRLDLYKDKEGVAEVQEWLSYLVPSFFALVVGIMYGCCRLRAMQLQSLAMTSIQMVSAMKSTSILPDQNIAAMAAGLPHF-STNYMRCWGRDVFISLRGLLLTTGRYEEAKEHILAFAKTLKHGLIPNLLDAG | |||||||||||||
4 | 1ei3C | 0.04 | 0.04 | 0.95 | 0.60 | EigenThreader | CGIADFFNKYRLTTDGELLEIEGLLQQATNSTGSIEYLIQHIKTIYPSEKQTLPQSIEQLTQKSKKIIEEIIRYENTILAHENTIQQLTDMHIMNSNKITQLKQKIAQLESHCQDIANKGARKSGKPQKAKYCEIDTYGNGWTVLQRRLGNEKIHLITT----------QKSYTCAEQDGGTNSYDNGIIWYSMKK | |||||||||||||
5 | 5imuA | 0.27 | 0.13 | 0.47 | 0.45 | HHpred | -----------------TGDRSAAIPKVDEFGPTLVESLPRIA---QAIALPAVRKT----------GVLENEAELLH-----GCITAVKESVLKAYPSHELTAVGDWMLLAAIEALYLANYHLAWYA-------------------------------------------------------------------- | |||||||||||||
6 | 3jacA | 0.16 | 0.13 | 0.82 | 0.33 | MRFsearch | ------GGGGGGFFHDILHTKYRAAT----DVYALMFLADIVDIIIIIFGFWAFGKHS----------AATDIASSLSDDFLFMLLVQFGTMVIDRALRKTVLGKLAFQVVLVVAIHIWMFFILPAVTE-RMFSQNAVAQLWYFVKCIYFALSAHLNLFLFQGFRLVPFLVELRAVMDWVWT-------------- | |||||||||||||
7 | 6xz4A2 | 0.12 | 0.09 | 0.74 | 0.53 | FFAS-3D | --------------------------------------KGKMQLVADLLLLSSEARPVLFEGPASSGESFEQCRDTIIARTLSILTHDVQSQLNMGRFGEAGDSLVELDLVVSLTECSAHAAYLAAVATP----GAQPAQRAAAVSAEGKAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGGAKMS-------- | |||||||||||||
8 | 6w2rA | 0.15 | 0.14 | 0.95 | 0.59 | SPARKS-K | ERRELEKVKAIEAAREGN-----TDEVREQLQRALEIARESAVKLALDVALRVAQEAAKRGNKDAIDEAAEVVVRIAEESNNSDALEQALRVLEEIAKAVLKSEKKAVKLVQEAYKAAQRAIEAAKRTGT-----PDVIKLAIKLAKLAARAALEVIKVNEALKKIVKAIQEAVESLREAEESGDPEKREKARERV | |||||||||||||
9 | 4owwA | 0.13 | 0.11 | 0.83 | 0.62 | CNFpred | ----------ERCMSIVTTAGVSEREANDALNAYVCKGHEEICLGLFTLILTEPA-------------QAQKCYRDLALVSMNIVLNKINQILMEKYL--KLQDTCRTQLVWLVRELVKSGVL--------GADGVCMTFMKQIAGGDVTAKNIWLAESVLDILT-SILIAMAVYTYLRLIVDHHGTAQLQALRQK | |||||||||||||
10 | 6v1vA | 0.04 | 0.03 | 0.76 | 0.83 | DEthreader | ----------------------------------------NGIYGFAGIQNVLSLQEFDELTSLASVDSFEFYLQTFHDVNFGRSALKTASELITKETRGSEIGKVYNFLIVLTSLQAKAFLTLTACRKLTDIDYTQMNHHIDGQKREFRILRESLTDLTYL-IAS--PDGYI-NI-SSVIKGRPANNFKNQSE-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |