>PF01295 (603 residues) EWIDFGGLTRIPAEEYFGSSLWQLYKSIDSPYKSVLKAILLEAYSWEYPHTQLLSVDAKR RFFAEERFEYCMDAYYLMLEKVTRYLERIDDHRRLDLVRRCFYLKTHEKLTREPSSGSVA WRRRVLQELTTEWQWSHEVLSELDNRRNWKVGQVKRAHNELLDALMLSYRNLIRFARRND ITSAISPEDISILARKLYAAFEVLPGKVTLLNPQISPDLHESDLTFIQVPAGRTNAAGWY LYKQPLDPYAILGQPSLEHNRYLSKLVAWSYFNGLLTESTCLHNVVRDTDLDIDKLYQLV SDIRNTFPIRRPQPSLQALSSPCEIRQLGLFINLENDPTTELKNRSIRFDFKNTDIFSYG PEQQCLVGSVDLVYRNSWNEVRTLNFSGENAMLDALKTVLGKMHQDAIPPESVDVFCYSK HMRGLIRNLVYQLVAECIEMRLKPVEQEKRRRFKAIRIGDQTHGLFFERRGVSVQKLENS VDFYSCISSNKLIGSPQLVMGKTDEPHPPEIVDSYASEGLIQFFFEDCDQGFNIYILDET NRIEVYRQCSGDKDEMVHGVNRFYTSAQDRFSYSANFINFNLPQFYDIVHSESGDCQVIP FKS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | EWIDFGGLTRIPAEEYFGSSLWQLYKSIDSPYKSVLKAILLEAYSWEYPHTQLLSVDAKRRFFAEERFEYCMDAYYLMLEKVTRYLERIDDHRRLDLVRRCFYLKTHEKLTREPSSGSVAWRRRVLQELTTEWQWSHEVLSELDNRRNWKVGQVKRAHNELLDALMLSYRNLIRFARRNDITSAISPEDISILARKLYAAFEVLPGKVTLLNPQISPDLHESDLTFIQVPAGRTNAAGWYLYKQPLDPYAILGQPSLEHNRYLSKLVAWSYFNGLLTESTCLHNVVRDTDLDIDKLYQLVSDIRNTFPIRRPQPSLQALSSPCEIRQLGLFINLENDPTTELKNRSIRFDFKNTDIFSYGPEQQCLVGSVDLVYRNSWNEVRTLNFSGENAMLDALKTVLGKMHQDAIPPESVDVFCYSKHMRGLIRNLVYQLVAECIEMRLKPVEQEKRRRFKAIRIGDQTHGLFFERRGVSVQKLENSVDFYSCISSNKLIGSPQLVMGKTDEPHPPEIVDSYASEGLIQFFFEDCDQGFNIYILDETNRIEVYRQCSGDKDEMVHGVNRFYTSAQDRFSYSANFINFNLPQFYDIVHSESGDCQVIPFKS | |||||||||||||||||||
1 | 1vt4I | 0.04 | 0.03 | 0.86 | 0.70 | DisCoVER | ---QVQRGGGGGGGGGGGGG-GGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGG--GGGG-------G--GGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGG--GGGGG-GGGGGGGGGGGGGGGGGGGGG-GG--GGGGGGGGGGGGGGGGGGGGGG---GG-GGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGG----------GGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGG----G---G--GGG--------------GGGGGGGGGGGGGG-GGGGGGGG- | |||||||||||||
2 | 1vt4I | 0.08 | 0.08 | 0.97 | 0.69 | CEthreader | SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDN-DPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
3 | 5efvA | 0.07 | 0.04 | 0.64 | 0.80 | EigenThreader | -----GSMSNKLI-----------------------------------TDLSR-------------VFD---------YRYVDENEYNFKLISDMLTDFNFSLEYHRNKEVFAHDGEQIVSDFLTYLNGRFSNMVLG---------HNGDGINEVKDAQDRLYHDYSTLDVFTKKVEKA--------VDEHYKEYRATEYRFEPKEQELSPYTNAVMQPRTKIIYMTQARG----NHYMLSRLKPN-------GQFLLVKNGGHGTH--NDDIDKIDKVLYQMDIPMEYTSDT--------------QPKTKEIGG----VNFQEAEGLDMYYDLET---------------------------GRKALLIGVTIGPGNNRIYSIGQRGVNQFLKN------ITQDTQNALD-----------------------------FPLPKAFRDAGWLDVLPGGALRQVLTRNSTERVIDIFNK---------KNNGAWNFCPQNAGYLSDLK-------IVGLDFYITTFKGIAGWILEVKSNTPGQVLRRNNFPS----------------------------AHQLVRNFGT---GGVGFEGKV | |||||||||||||
4 | 1vt4I | 0.12 | 0.09 | 0.73 | 0.62 | HHpred | ------PKSILSKEEIDHIGTLRLFWTLLSKQEEMVQKFVEEVLRQRQPSMTRMYIEQRDRLYNDNQVFSRLQPYL---------------------KLRQALLELRPAKNVLIDGSGKTWVAVCLSYKV---------QCKMDFKIFWLPETVLEMLQKL------LYQIDPNWTSRSDHS-----SNIKLRIHSIQAELRRLLK-----------SKPYENCLLVLLNV--QNAKAWNAF---------NLSCKILLTTRFKQVTDFLSAA----TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ---DLPREVLTTNPRRLSIIASIRD---------------------------------------GLATWDNWKHVNCDKLTTIIESSLNVVNKLHKYSEKQPKESTISIPSIYLELKVKLEYALHRSIVDHYNIPKT-FDSD-DLIPPYLDQYFYS------------HIGHHLKNI-EHPMTLFRMVFLDFR-----FLEQKIRHDSTA----------WNASGSILNTLQQLYKPYICDNDYERLVNAILDFLPKIEEN------LICSKYTDLLRIALMAE---------- | |||||||||||||
5 | 5xjcY | 0.11 | 0.07 | 0.62 | 0.42 | MRFsearch | ------------DPE---------------------------------------KWEIKQMIAANVLSKEEFPLPDAEGRQIAANMR----------------------GIGMMPNDIPEWKKHAF---------KKTQMSILEQRES---LPIYKLKEQLVQAVHDNTTQITQYLAEAGKIGCTQPRRVASVAKRVSEEFGCCL---------------GQEVGYTIRFEDCTSPETVIKYMT------------------DGMLLRECLIDPDLTQYAIIMLDEHERTIHTDVLFGLLKKTVQKR---------------QDMKLIVTSAT---LDAVKFSQ---------------------YFYEAPIFTIPGTYPVEILYTKETDYLDASLITVMQIHLT--EPPGDILVFLTGQEEIDTACEILYERMKSLGPD---------VPELIILPV---------------YSA---------------------------LPSEMQTRIFDPAPPGSRKVVIATNIIDGIYYVVDPGVKQKVYNSKTGIDQLVVTPIAQAKQRAGRAG-------RTGPGKCYRLYTE------------ | |||||||||||||
6 | 6ec8A | 0.10 | 0.09 | 0.91 | 0.85 | FFAS-3D | -------ECGLPVSAIESTDSFALIRRQVRETAWLKGEGLAVDLGLLIGERGPVLVGLRRALHTGRLPASALPA--ELAARVADWVTRMRALTRARELPELFAAEARV-------------KEKVLAQVAADPGFSPELAADLDRLAEPARRPKTQKLLRLAKYVARAAVKVAVWENGEDWADGAIVRSGEWL-HGALRAWLARPE-------------NLVRSRLRLNPSLVIRADKAEFLGFPPREPIIR----MGLTPVVATVLRLAEPDGWIDPMGFRDRLARDLPAEPEQVDRLLRSLIEAGLTRAGLPETGEWAE--------IRAALRHDPHGEDPEAYRVRLARLKRAMTMPQGDTTALLHETAVVTRPVASLNPTAWGRGLSDLDVVRRWLEYLRARYGEHARVPFLTFHRHVQEEIARELAKLREAARELALGRPEHDG-----IQRVDPACYVQPAPEGRLVLNVVRGLRRLSHLIGRVRGEAVDHPMVADEPEGTVYAELSDRSRDRRLPLEVVLAPETGLAELRSRRGFRVIPLHLGMAAEFQLPPAARFLERAFGVTYLPQEVTRYPRVEVGRVVVQRR-RWLAPA--- | |||||||||||||
7 | 5mz61 | 0.09 | 0.08 | 0.85 | 0.59 | SPARKS-K | VNVTTAQTR-----DSMSAMILNLRVALKSFFRVLQTTNTLAYYSSIIEEAGSLMRVSCVNLLSSNPIVCNVHSSFAAEYMMSYAIHSHRDSIQNEIFGMCVIRWLTKKLDSKESAD--EDTMEIFNNALKIVRYLQTQLGRQLEFPSWDKERFEKVRLAMRNEMNHRCRLFAYVGRTSR-----DPAESTQIGARNAVQSRLEKCKRGLVTMSGHDRFKPDEMTLVQIAMA-DDKTIYLVKLHA-------DRDPI-----------------------IMPLAHY------SQAVELMDKFTFLLDEYPGDITPEEFWKRRFVDEVLLMPSGQLGPKAAELAIKIHKLSKGGLLLGEAKEMVYQSKLM-----------------DAKSWEALILRFCEKFKSFNQDEKKYTYLVICPHLSPIFDERQV-SIHSTFSQLEAMKSQEKQIPL---QIDNAYYILDPDNNL-----GETQKRMVEYINKFNWE---GTVGSAPKSNEISAALSQRD------AFFFSGSSVMPISLLMGCGSVRTIPQALGAILDYAMEIDRFLIRMIDDCFELRSKARLKYVVMYGLPVVAKQ--------- | |||||||||||||
8 | 2fgeA | 0.10 | 0.08 | 0.80 | 0.83 | CNFpred | FGIGLKGVSEENVQKVEELIMDTLKKLA-DAVEASMNTIEFSLRENNTPRGLSLMLQSISKWIYDMDPFEPLK-YTEPLKALKTRIAEEGSKAVFSPLIEKLILNNSHRVTIEMQP-DPEKATQEEV-------EEKNILEKVKA----------AMTEEDLAELARATEELKLKQETP-----DPPEALRCVPSLNLGDIPKE---PTYVPTEVGD---INGVKVLRHDLFTNDIIYTEVVFDIG---------SLKHELPLVPLFCQSLLEMGT---------------KDLTFVQLNQLIGRKTGGISVYPLTSSVRKDEPCSKIIVRGKSM-TDQQRFKQFQSRARRLRGSGHGIAAARMDAMLNIAGWMSEQMGGLSYLEF-DWEGISSSLEEIRRSLLA----RNGCIVNMTADKSLTNVEKSVAKFLDLLPEGGLVTWDGRLPLRNEAIVIPQVNYVGKAGNIYSTGYELDGSAYVISKHISN-------------------TWLWDRVR--VSGGAY-----GGFCDFDSHSGVFSYLSYRDPNLLKTLDIYDGTGDFLRGLD-------------------------------- | |||||||||||||
9 | 6mu1A | 0.08 | 0.05 | 0.66 | 0.67 | DEthreader | -----A-IDVVLDYLSDLCVSMNKSI---------------VLSYYRYQLNFARQYLAINEIS-------GQ---LD-VDLILRCMSDENLPYDLRASFCRLLHMDEQ--DDYD----GASKDEIKERFAQTMEFVEEYVALIYFGFYFSLLRLTKILLAIL---PE-KE-----------------------DI-MVMDTKL--K-IEILQFILNVRLDRIQSHEEQAE-------GIFG-HG------G-RTFLRVLLHLTVGALQLLFRHFSQRQEVLQ---------VQAELSVLVDV-------------------LEENEECILQREMMTKDRGY---------------------EMSLAEV-----------------QCHLDKEGASNLVIDLI-M-NASSDRVFH-----------ESILLAIA--------------------LLEGGNTQHFFLTEDKKSEFLCENHNRDLQNFLR-CQNNKTNYNLVCLQTLESLT----------------IAHEIDTLILN---MDLLELKASILYNMRPKELVEVIKKAYMQGEVEFED-DGDEAEFYHTQIE-VRLTEQIVFPVKE | |||||||||||||
10 | 3ea5B | 0.10 | 0.09 | 0.95 | 0.61 | MUSTER | KLLTLKNELVSKDSVKTQQFAQRWITQVSPEAKNQIKTNALTALVSIEPRIQLIAAIADIELPHGAWP--------ELMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQVSSSNNILIAIVQGAQSTETSKLAALNALADSLIFNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCKIMSKYYTFMKPYMEQALYAL---IATMKSP-NDKVASMTVFWSTICEEEIDIAY------ELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNED---PEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNWRNREVMAFGSIMDGPDKVQRTYYVHQALPS--ILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDHPKATNCSWTIILVEQLASPIYNFYPALVDGLIGAAN-RIDNEFNARASAFSALTTMVEYATDTVAETSASI--STFVMDKLGQTMSVDENQL--TLEDAQSLQELQSNILT--VLAAVIRKSPSSVEPVLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLNQVDSPVSIIADISNSLEEDFR--RYSD | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |