Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | SWSFVDGNDNSSTYQYIYNLTICELNGTEWLSSHFDWAVETFVLYPVATHILSLGFLTTSHFLDALGLGAVSTTGFVGGRYVLSSVYGACAFAALVCFVIRAAKNCMACRYARTRFTNFIVDDRGRIHRWKSPIVVEKLGKAEVGGDLVTIKHVVLEGVKAQPLTRTSAEQWE |
1 | 3mk7A3 | 0.07 | 0.04 | 0.60 | 0.77 | DisCoVER | | -------------------TDWTIGYHLVPK--VFGRMHSGLINTHFWLATIG--TV-LYIASMWVNGIAQGLMWNDDGTLTYSFSLEASHPGFVVRMIGG-AI--FF--AGMLVMAYN----------TWRTVQAA---------------------------KPAEY--D- |
2 | 3uqyL | 0.05 | 0.03 | 0.76 | 0.83 | DEthreader | | ------------------------CGVCTGVHLALALWCDHLVHFLAGMDWIDYLANLMGFAHYLEALDFQREIVKIHVQSIITRTADFINVMIPDALAIGQFNKPWSEIG-------TGLSDKC---------L-SYGGGAVAPRWRMVARTLTVMMGIQSRGWNAPCLACS |
3 | 3h6jA | 0.11 | 0.11 | 1.00 | 0.56 | CEthreader | | SLYLIYRRATEHVGGSDGRVVFSKLEGGIWSAPTIVAQAGGQDFRDVAGGTMPSGRIVAASTVYETGEVKVYVSDDSGVTWVHKFTLARADYNFAHGKSFQVGARYVIPLYAATGVNYELKWGEGSTIYSGNTPYNETSYLPVGDGVILAVARVGSGAGGALRQFISLDDGGT |
4 | 5jtaA | 0.06 | 0.05 | 0.92 | 0.65 | EigenThreader | | KILNANRSYYLCRSQPPFLTEMALVVFKKLGLKRAFQASIKEYKTVLDEFFLHDRGVRESGDLNSLLYKYEIDIADFIKEFCWKEMAKIRQEKITKYMWEQAQKMVEKA-----LPKLEML----GGLAACDYPFGWIVVEKYDVTGFGWVNA-----SYILGLKYMNSHARR |
5 | 4c2mB4 | 0.18 | 0.12 | 0.69 | 0.32 | HHpred | | -------------------------------------------VSRIPSILYSLGVAPASHTF---AAGPSLCCVQIDGKIIGW-VSHEQG-KIIAD-TLRYWKVEGEIGYVRGQYGLYLFGGHSRMLR---PVRYLPLDKEDIVGPFEQVYMIAVTPQEIQNNVHTHVEF-- |
6 | 5wudA2 | 0.16 | 0.07 | 0.44 | 0.65 | MRFsearch | | ----------------------------------LYADAIGLGAFASSGASLAYSV--SNNVILVVIVGAITAVGGGREFYATTAVIGSFVYALIVSFLITLILRILAMELK------------------------------------------------------------- |
7 | 3mk7A3 | 0.16 | 0.08 | 0.46 | 0.43 | FFAS-3D | | ---------------------------TDWTIGHVHAGAALYHLVPKVFWLATIGTVLYIASMWVNGIAQVESLEASHPGFVVRMIGGAIFFAGMLVMAYNTWRTVQ------------------------------------------------------------------ |
8 | 6li9B | 0.08 | 0.08 | 0.97 | 0.69 | SPARKS-K | | -----LGLISGISIIVGTIIGSGIFVSPKSVLSNTEAVGPCLIIWAACGVLATLGALCFAELGTMIGEYPYLMEAYGPIAYLFSWASLIVIKPTSFAIICLSFSEYVCAPFYVGCKPPQIVVKCLAAAAILFISTVNSLSVRLGSYVQNIFTAAKLVIVAIIIISGLVLLAQG |
9 | 3rkoB | 0.10 | 0.06 | 0.56 | 0.76 | CNFpred | | ----------------MVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILA------------------------------------------------------------ |
10 | 6w5cA2 | 0.06 | 0.05 | 0.80 | 1.00 | DEthreader | | --------KPHVESRRSFLEYLSSIRNHSSQAKEYREEIFELLRDGLSVLKLS--SLSNLSFVMFKVAKSLIGTYFGHLLKKADPEMFALRLALEEKRLNKVKSKKEVIANKIVAKAL-G----W--------DPFVFRAYALDDAVCNADLVAAY--NVGLVD--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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