Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | QFPFMVNAIAISIVVAIPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAYIIGIPFAIGAFIAGLLCAVTTGFLDDNSRLKRDTIMGIVFSGMFGAGLVLYVAIQSDVHLDHILFGDMLGISLRDIGQTTAIALVIALIIGLKWRDFLLHAFDPTQAKASGLRGGLLHYGLLCMIALTIVATLQSVGIILSISLLIAPGAIALLLVRRFIHALLLAVAVAIGCSAGGVWLAFYLDSAPAPTIVVLFTALFVVAFV |
1 | 2nq2A | 0.15 | 0.15 | 0.99 | 1.33 | DEthreader | | SVIVRLPRILTALCVGAGLALSGVVLQGIFNVNPHIGVTSGSAFGGTLAIFGFSGLFTSTILFGFGTLALVFLFSFKSL-LMLILIGMILSGLFSALVSLLQISDKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSILLSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISGSI--GWVGLIIPHLSRMLGANHQSLLPCTMLVGATYMLLVDNVARSLSIPISILTALIGAPLFGVLVK |
2 | 4g1uA | 0.13 | 0.13 | 0.99 | 1.33 | DEthreader | | NIWIRLPRVLLAVVVGCALAVSGTIMQGFRNLADPGGISSGAALCVGLIIV-MASHMVGAFIGSLAISTIIFTLSWGHGNLARLLLAGIAINACGAAVGVLTYISDLRQFSLWSMGSLGQAQWSTLLVASSLILPTCILGLLQARQLNLLQLGDEEAHYLGVNVRQAKLRLLLLSAILIGAAVAVS-GVI-GFIGLVVPHLIRMRIGDHRWLLPGAALGGACLLLTADTLARTVAMPVGLLTSLLGGPYFLWLIL |
3 | 5b57A | 0.17 | 0.16 | 0.99 | 3.37 | HHpred | | -LDIRAPRVVLALLVGGGFGATGAAMLFRNADPGLVGVSSGAALGATTLIVLGPALPVAAFAGGLAVAALVYRLAASRRLALLLLAGIAINALVGAAIGLLTFVDALRSLTFWSLGSLGGAQWPTLAAVAPCVALGGVLLVRERDALNALQLGETEALHLGVPVQRLKRRVLVAVALAVGALVSCAGIIGFIGL-VAPHCVRLACGPDQRIVLPGAALLGALLTLAADLAARTADIPLGVLTALLGAPFFLALLW |
4 | 4g1uA | 0.17 | 0.16 | 0.99 | 1.20 | DisCoVER | | WLNIRLPRVLLAVVVGCALAVSGTIMQGLNLADPGLGISSGAALCVGLIIVMLYSHMVGAFIGSLAISTIIFTLSRWGNLARLLLAGIAINALCGAAVGVLTYDQQLRQFSLWSMGSLGQAQWSTLLVASSLILPTCILGLLQARQLNLLQLGDEEAHYLGVNVRQAKLRLLLLSAILIGAAVAVSGVI--GFIGLVVPHIRMRIGADHRWLLPGAALGGACLLLTADTLARTAEMPVGLLTSLLGGPYFLWLI- |
5 | 5b57A | 0.16 | 0.16 | 0.99 | 0.62 | MRFsearch | | --DIRAPRVVLALLVGGGFGATGAAMQALFADPGLVGVSSGAALGATTLIVLGAALPVAAFAGGLAVAALVYRLAASRALPLLLLAGIAINALVGAAIGLLTFVAQLRSLTFWSLGSLGGAQWPTLAAVAPCVALGGVLLVRERDALNALQLGETEALHLGVPVQRLKRRVLVAVALAVGALVSCAGIIGFIG-LVAPHCVRLACGPDQRIVLPGAALLGALLTLAADLAARTVDIPLGVLTALLGAPFFLALLW |
6 | 2nq2A | 0.17 | 0.17 | 0.99 | 2.88 | SPARKS-K | | IFQVRLPRILTALCVGAGLALSGVVLQGIFRNPHIIGVTSGSAFGGTLAIFFGFSLFTSTILFGFGTLALVFLFSFKS-LLMLILIGMILSGLFSALVSLLQYISDLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSILLSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISGSIGWVGL-IIPHLSRMLVGANHQSLLPCTMLVGATYMLLVDNVARSAEIPISILTALIGAPLFGVLVY |
7 | 4g1uA | 0.16 | 0.16 | 0.99 | 1.61 | MAPalign | | WLNIRLPRVLLAVVVGCALAVSGTIMQGRNLADPGLGISSGAALCVGLIILALYSHMVGAFIGSLAISTIIFTLSRWGHGARLLLAGIAINALCGAAVGVLTYISQLRQFSLWSMGSLGQAQWSTLLVASSLILPTCILGLLQARQLNLLQLGDEEAHYLGVNVRQAKLRLLLLSAILIGAAVAVSGVIG--FIGLVVPHLIRRIGADHRWLLPGAALGGACLLLTADTLARTLEMPVGLLTSLLGGPYFLWLI- |
8 | 5b57A | 0.16 | 0.16 | 1.00 | 1.23 | CEthreader | | LLDIRAPRVVLALLVGGGFGATGAAMQALFADPGLVGVSSGAALGATTLIVLGAALPVAAFAGGLAVAALVYRLAGRLALPLLLLAGIAINALVGAAIGLLTFVADLRSLTFWSLGSLGGAQWPTLAAVAPCVALGGVLLVRERDALNALQLGETEALHLGVPVQRLKRRVLVAVALAVGALVSCAGIIGF-IGLVAPHCVRLACGPDQRIVLPGAALLGALLTLAADLAARTVDIPLGVLTALLGAPFFLALLW |
9 | 4g1uA | 0.18 | 0.17 | 0.98 | 1.45 | MUSTER | | WLNIRLPRVLLAVVVGCALAVSGTIMQG---GLLGISSGAALCVGLIIVMLALYSHMVGAFIGSLAISTIIFTLSRWGHGNRLLLAGIAINALCGAAVGVLTYISDDRQFSLWSMGSLGQAQWSTLLVASSLILPTCILGLLQARQLNLLQLGDEEAHYLGVNVRQAKLRLLLLSAILIGAAVAVSGVIGFIG-LVVPHLIRMRIGADHRWLLPGAALGGACLLLTADTLARTAEMPVGLLTSLLGGPYFLWLIL |
10 | 2nq2A | 0.17 | 0.17 | 0.99 | 5.18 | HHsearch | | IFQVRLPRILTALCVGAGLALSGVVLIFRNVNPHIIGVTSGSAFGGTLAIFFGFGLFTSTILFGFGTLALVFLFSF-KSLLMLILIGMILSGLFSALVSLLQYITELPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSILLSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISGSIGWVGL-IIPHLSRMLVGANHQSLLPCTMLVGATYMLLVDNVARDAEIPISILTALIGAPLFGVLVY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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