>PF00872 (371 residues) LHALAEENLAAASPDLLRAMIKTFADALMSAEADALCNAEYGQVSDERVNHRNGYRPREW DTRAGTVELAVPKLRQGSYFPHWLLERRRRAEQALISVVATAYLLGVSTRRVEKLAESLG VTQLSKSQVSAMAKHLDEQVAAFRNRPLDAGPYSFVWVDALTQKVREGGRIVNVHALIAV GVNADGHREILGLDVATAEDGAGWLAFLRSLIARGLSGVQLVISDAHAGLVDAIGAVLPG ASWQRCRTHYARNLLSQVPKSAQPWVATLLRTVFEQPDTDAVQAQMTHVLDALEAKFPKA AAHLDAAQHDLLAFTAFPREIWRQIWSNNPQERLNKEIRRRTDVVGIFPDRTAVIRLVGA VLAEQNDEWTD |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LHALAEENLAAASPDLLRAMIKTFADALMSAEADALCNAEYGQVSDERVNHRNGYRPREWDTRAGTVELAVPKLRQGSYFPHWLLERRRRAEQALISVVATAYLLGVSTRRVEKLAESLGVTQLSKSQVSAMAKHLDEQVAAFRNRPLDAGPYSFVWVDALTQKVREGGRIVNVHALIAVGVNADGHREILGLDVATAEDGAGWLAFLRSLIARGLSGVQLVISDAHAGLVDAIGAVLPGASWQRCRTHYARNLLSQVPKSAQPWVATLLRTVFEQPDTDAVQAQMTHVLDALEAKFPKAAAHLDAAQHDLLAFTAFPREIWRQIWSNNPQERLNKEIRRRTDVVGIFPDRTAVIRLVGAVLAEQNDEWTD | |||||||||||||||||||
1 | 6xg8A | 0.23 | 0.22 | 0.94 | 1.33 | DEthreader | --------------ALKDLLGDTIQNMLEAELDEH-L-GYESTEEAK-SNYRNGYTSKTLKSSVGQVEIDIPRDRNAEFEPKIVPRY-KRDISEIENKIIAMYARGMSTREINEQIQEIYGFEVSAEMVSKITDKILPEIEEWQKRPLG-EVYPIVFIDAIHFSVKNDGIVGKKAVYIVLAIDIEGQKDVIGIYVGENESSKFWLSVLNDLKNRGVKDILILCADALSGIKDAINAAFPNTEYQRCIVHQIRNTLKYVSD-DRKEFARDLKRIYTAPNEKAGYDQMLEVSEKWEKKYPAAMKSWKSNWDVICPFFKYSEELRKIMYTTNTIESLNSSYRRINKSRTVFPGDQSLLKSIYLATVKITSKWT- | |||||||||||||
2 | 6xg8A | 0.24 | 0.19 | 0.79 | 1.17 | DEthreader | ----------------------------------------------------AEFEPKI----------VP-R------YK--R--DI--SE--IENKIIAMYARGMSTREINEQIQEIYGFEVSAEMVSKITDKILPEIEEWQKRPLGE-VYPIVFIDAIHFSVKNDGIVGKKAVYIVLAIDIEGQKDVIGIYVGENESSKFWLSVLNDLKNRGVKDILILCADALSGIKDAINAAFPNTEYQRCIVHQIRNTLKYVSDKDRKEFARDLKRIYTAPNEKAGYDQMLEVSEKWEKKYPAAMKSWKSNWDVICPFFKYSEELRKIMYTTNTIESLNSSYRRINKSRTVFPGDQSLLKSIYLATVKITSKWTM | |||||||||||||
3 | 6xg8A | 0.23 | 0.23 | 0.99 | 11.17 | HHpred | KKELIRNLISKDLQEALKDLLGDTIQNMLEAELDEHLGYEKYESTEAKSNYRNGYTSKTLKSSVGQVEIDIPRDRNAEFEPK-IVPRYKRDISEIENKIIAMYARGMSTREINEQIQEIYGFEVSAEMVSKITDKILPEIEEWQKRPLG-EVYPIVFIDAIHFSVKNDGIVGKKAVYIVLAIDIEGQKDVIGIYVGENESSKFWLSVLNDLKNRGVKDILILCADALSGIKDAINAAFPNTEYQRCIVHQIRNTLKYVSDKDRKEFARDLKRIYTAPNEKAGYDQMLEVSEKWEKKYPAAMKSWKSNWDVICPFFKYSEELRKIMYTTNTIESLNSSYRRINKSRTVFPGDQSLLKSIYLATVKITSKWTM | |||||||||||||
4 | 6xg8A | 0.23 | 0.23 | 0.98 | 2.61 | DisCoVER | IRNLISEYNITDLQEALKDLGDT-IQNMLEAELDEHLGYEKYESTEEKSNYRNGYTSKTLKSSVGQVEIDIPRDRNAEFEP-KIVPRKRDISEIE-NKIIAMYARGMSTREINEQIQEIYGFEVSAEMVSKITDKILPEIEEWQKRPLG-EVYPIVFIDAIHFSVKNDGIVGKKAVYIVLAIDIEGQKDVIGIYVGENESSKFWLSVLNDLKNRGVKDILILCADALSGIKDAINAAFPNTEYQRCIVHQIRNTLKVSDKDRK-EFARDLKRIYTAPNEKAGYDQMLEVSKWEKKYP-AAMKSWKSNWDVICPFFKYSEELRKIMYTTNTIESLNSSYRRINKSRTVFPGDQSLLKSIYLATVKITTMRY- | |||||||||||||
5 | 6xg8A | 0.24 | 0.23 | 0.99 | 1.33 | MRFsearch | --ELIRNLISEDLQEALKDLLGDTIQNMLEAELDEHLGYEKYESTEEKSNYRNGYTSKTLKSSVGQVEIDIPRDRNAEFEPK-IVPRYKRDISEIENKIIAMYARGMSTREINEQIQEIYGFEVSAEMVSKITDKILPEIEEWQKRPLGE-VYPIVFIDAIHFSVKNDGIVGKKAVYIVLAIDIEGQKDVIGIYVGENESSKFWLSVLNDLKNRGVKDILILCADALSGIKDAINAAFPNTEYQRCIVHQIRNTLKYVSDKDRKEFARDLKRIYTAPNEKAGYDQMLEVSEKWEKKYPAAMKSWKSNWDVICPFFKYSEELRKIMYTTNTIESLNSSYRRINKSRTVFPGDQSLLKSIYLATVKITSKWTM | |||||||||||||
6 | 6xg8A | 0.24 | 0.23 | 0.99 | 2.14 | SPARKS-K | KKELIRNLISEYLQEALKDLLGDTIQNMLEAELDEHLGYEKYESTEEAKNYRNGYTSKTLKSSVGQVEIDIPRDRNAEFEPKIV-PRYKRDISEIENKIIAMYARGMSTREINEQIQEIYGFEVSAEMVSKITDKILPEIEEWQKRPL-GEVYPIVFIDAIHFSVKNDGIVGKKAVYIVLAIDIEGQKDVIGIYVGENESSKFWLSVLNDLKNRGVKDILILCADALSGIKDAINAAFPNTEYQRCIVHQIRNTLKYVSDKDRKEFARDLKRIYTAPNEKAGYDQMLEVSEKWEKKYPAAMKSWKSNWDVICPFFKYSEELRKIMYTTNTIESLNSSYRRINKSRTVFPGDQSLLKSIYLATVKITSKWTM | |||||||||||||
7 | 6xg8A | 0.23 | 0.23 | 0.98 | 2.29 | MAPalign | -KKELIRNLISDLQEALKDLLGDTIQNMLEAELDEHLGYEKYESTEAKSNYRNGYTSKTLKSSVGQVEIDIPRDRNAEFEPKIVPRYKRDIS-EIENKIIAMYARGMSTREINEQIQEIYGFEVSAEMVSKITDKILPEIEEWQKRPLG-EVYPIVFIDAIHFSVKNDGIVGKKAVYIVLAIDIEGQKDVIGIYVGENESSKFWLSVLNDLKNRGVKDILILCADALSGIKDAINAAFPNTEYQRCIVHQIRNTLYVSDKDRK-EFARDLKRIYTAPNEKAGYDQMLEVSEKWEKKYPAAMKSWKSNWDVICPFFKYSEELRKIMYTTNTIESLNSSYRRINKSRTVFPGDQSLLKSIYLATVKITSKW-- | |||||||||||||
8 | 6xg8A | 0.24 | 0.23 | 0.99 | 2.10 | CEthreader | LISEYNITSAKDLQEALKDLLGDTIQNMLEAELDEHLGYEKYESTEAKSNYRNGYTSKTLKSSVGQVEIDIPRDRNAEFEPK-IVPRYKRDISEIENKIIAMYARGMSTREINEQIQEIYGFEVSAEMVSKITDKILPEIEEWQKRPLG-EVYPIVFIDAIHFSVKNDGIVGKKAVYIVLAIDIEGQKDVIGIYVGENESSKFWLSVLNDLKNRGVKDILILCADALSGIKDAINAAFPNTEYQRCIVHQIRNTLKYVSDKDRKEFARDLKRIYTAPNEKAGYDQMLEVSEKWEKKYPAAMKSWKSNWDVICPFFKYSEELRKIMYTTNTIESLNSSYRRINKSRTVFPGDQSLLKSIYLATVKITSKWTM | |||||||||||||
9 | 2qenA | 0.12 | 0.10 | 0.83 | 0.46 | MUSTER | --MLFDLRPKTRREDIFEEESRKLEESLENYPL---LGIR-------------RV--RAFLNERPGILIDCRELYAERGHITR---------EELIKELQSTISPFQKFQSKFKISLNLKFLTLEPRKLREVFRELNDLGEELG--------EFIVAFDEAYLRFYGSRGGKELLALFAYAYDSLPNLKIILTGS----EVGLLHDFLKILYGRIAGEVLV----DKDTSVEFLKRGFREVNLDV--ENEIEEAVELLD--IPGWLVVFGVEYLRNGD---FGRAMKRTLEVAKGLIMGELEELRRRSPRYVDIL---RAIALGYNR-------WSLIRDYLAVKGTKIPEPRLYALLENLKKM--VEEDN | |||||||||||||
10 | 6xg8A | 0.24 | 0.23 | 0.99 | 6.75 | HHsearch | KKELIRNLIAKDLQEALKDLLGDTIQNMLEAELDEHLGYEKYESTEAKSNYRNGYTSKTLKSSVGQVEIDIPRDRNAEFEPK-IVPRYKRDISEIENKIIAMYARGMSTREINEQIQEIYGFEVSAEMVSKITDKILPEIEEWQKRPLG-EVYPIVFIDAIHFSVKNDGIVGKKAVYIVLAIDIEGQKDVIGIYVGENESSKFWLSVLNDLKNRGVKDILILCADALSGIKDAINAAFPNTEYQRCIVHQIRNTLKYVSDKDRKEFARDLKRIYTAPNEKAGYDQMLEVSEKWEKKYPAAMKSWKSNWDVICPFFKYSEELRKIMYTTNTIESLNSSYRRINKSRTVFPGDQSLLKSIYLATVKITSKWTM | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |