>PF00859 (294 residues) QESFVTSGVFNVTELVQVSRTPVVTGTGPNFSLGELQGHLAYDLNPTGTGMRRTLPSTSS SGSKRHKSGSMEDDIDTSPSGEFYTSPSSPASSSRNWQEEMEGGISPTVKKTEMDKSPFS SPSPQDSSPRLSSFTQHHRPVIAVHSGISRSPHPSSSLHFPTTSILPQTASTYFPHTAIR YPPHLGAQDPLKDLVSLACDPSNQQPGPLNGSGQVKVPSHYISSQMLAPPPPPGMSRLTL PPDSKSATTTTEGGANSPTSPTYSAPGTPPANRSFVGIGPRDPGSLYQAQSWYL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | QESFVTSGVFNVTELVQVSRTPVVTGTGPNFSLGELQGHLAYDLNPTGTGMRRTLPSTSSSGSKRHKSGSMEDDIDTSPSGEFYTSPSSPASSSRNWQEEMEGGISPTVKKTEMDKSPFSSPSPQDSSPRLSSFTQHHRPVIAVHSGISRSPHPSSSLHFPTTSILPQTASTYFPHTAIRYPPHLGAQDPLKDLVSLACDPSNQQPGPLNGSGQVKVPSHYISSQMLAPPPPPGMSRLTLPPDSKSATTTTEGGANSPTSPTYSAPGTPPANRSFVGIGPRDPGSLYQAQSWYL | |||||||||||||||||||
1 | 3jbrF | 0.09 | 0.06 | 0.65 | 1.27 | MRFsearch | ----------------------------------------------GGGGGGGGGGGGGGGGGG--------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------GGGGGGGGGGGGGGGGGGGGGGGGGG---------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCITEQTQYFF | |||||||||||||
2 | 6ybt2 | 0.12 | 0.12 | 0.93 | 1.33 | SPARKS-K | HERSITQIKYNREGDLLFTPIVNVWYSVNGERLGTYMGHWCVDADWDTKHVLRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTF----VSFFDLRDPSQIDNNEPYMKIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAKSGEVLVNVKEHRQINDIQLSRDMTMFKDNTAKLSTTLEHQKTFRTERPVNSALSPNYDHVVLGGGQEAMDVTTTSTR------IGKFEARFFHLAFEEEFGRVKGHFGPINSVAFHPDG-----KSYSSGGEDGYVRIH------- | |||||||||||||
3 | 4z80A1 | 0.05 | 0.03 | 0.74 | 0.84 | DisCoVER | -DRFNINHVDLIWRWTEGVYVGYMYDSSAYCPYMAAGPNYGKVIAFTKRDGSRSDMTR------WKNEIHANVMPHTCASRAPGAAE----VAKSIE-GFAMYAGYLTHCPYNVNVYRQDM---------V--TDKEFVTEPLRFLDEYAFHGHKGYDYKGQTSHVGCPPYNPPHTHRSLPAMFDMECRLLGYHT-QDFRS---STCAELTTDDTNAF-YCV---RPMKTSSNMVYVTSHT----------------------------------RPDHET-------KCP--- | |||||||||||||
4 | 5nnzB | 0.07 | 0.07 | 0.95 | 0.77 | CEthreader | --------TFYLFKVLKAHILPLTNVAGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAESFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGH------EGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQC | |||||||||||||
5 | 5iwkA | 0.07 | 0.07 | 0.99 | 0.67 | EigenThreader | PLLLAAKENNKLLKFEGCEVHQKGAMGETALHIAALYELVFEPMTSELYEGQTASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVPNNQGLTPFKLAGVEGNIVMFQHLMQKRLYDLTEIDSSGDDQSRPLKPRITNRTNPRDNTLLQQKLLQEAYVTPKDAVIILLVE--IPDIFRQTILGGPFHVIIVTYAFMVLVTMVMRLTNSDGEVVPMSFALVLGWCNVMYFARGMQMAVVILGFASAFYIIFQTEDPDELGHFYDYPMAL | |||||||||||||
6 | 3nvaA | 0.18 | 0.14 | 0.76 | 0.36 | HHpred | -YIVVTGGVLSSKGTLVASIGMLLKRRGYNVTAVKID--PYINVDAGTMNLERNMTKYNNAGKKDMRYASKINNAEIEIGGT---------------VGDIESLPAVRQLKLEEDNVIFVALVEYLVTGELKKPLQHSQPDFIV----GRATLPDDFTNVKVDHIVSSVETSYIKGNVGKYTKL---KDSYISRPKLIWIESTDINGVLPGFGSHNIPGICFGFQLSI----VEFARDVLLSEA----NSTEINPN-------------------------------------- | |||||||||||||
7 | 4qn8A1 | 0.25 | 0.05 | 0.21 | 0.47 | MRFsearch | ---------TQTQRLINTYGASLKNGTISNEELIILLDPNTFTK------------------------------------SEGYVDPNAPVSDSNH------------------------------------------------------------------------------------------SKDAIKDFVLTI------------------------------------------------------------------------------------------------ | |||||||||||||
8 | 4nl6A | 0.18 | 0.14 | 0.80 | 0.52 | FFAS-3D | -----------------------------------------------------AMSSGGSGGGVPEQEDSVTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKV----GDKCSAIWSEDGCIYPATIASIDFKR---ETCVVVYTGYGNREENLSDLLSPSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHPPFPSGPPIIPPPPPICPDSLDDADALSMLISWYM | |||||||||||||
9 | 5fvmC | 0.11 | 0.10 | 0.93 | 1.18 | SPARKS-K | --VILASAFWEAL---TGVCSRTIQHADSQVNRLEITSDKKYLAAAGHLHVRLYDIRSNNPNPVSSFEGHKGNSIAFQQENRWMVSSSE-DGTIKVWDVR---SPSVQRNYKHNAPVNEVAIHPNQGELISCDQDGNIRDLGENQCTNQLTPEDNTPLQSLSVASDGSMLVAGNNKGNCYVWRMPHHTD-----------ASTLEPVTKFKSHTKYITRVLLSVKNLATCSADHTARVWNIEDNYQLETTLDGHQRWVWDCAFSADSTACSDHYVRLWDLSTSEIVRQYGGHHK | |||||||||||||
10 | 6bpqA | 0.08 | 0.05 | 0.72 | 0.67 | DEthreader | CVVASLVCVESLFLILTVAFALYAF-------NWNGQLKLLLEWN----VMFTALFVFLEGLNLRKFLTTEVLRELYTNNFSFMVEFRRGRHPLQALFEAWGGSNCLEAVFLSQWYGRKNKIILCLFF------FV-FSWVIYIALLFAYLLMDFQKA-IVFRLHS----------S-YSGRVI-FCLDYIVFTLRLIFTVSRILQRMMIDVFFFL--------------------------------------FLFAVWMVAFGVARILPEITILVCYMLS------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |