>PF00803 (230 residues) QQSSAATSDELQKILFSPEAIKKMATECDLGRHHWMRADNAISVRPLVPEVTHGRIASFF KSGYDAGELSSKGYMSVPQVLCAVTRTVSTDAEGSLRIYLADLGDKELSPIDGQCVTLHN HDLPALVSFQPTYDCPMETVGNRKRCFAVVIERHGYIGYTGTTASVCSNWQARFSSKNNN YTHIAAGKTLVLPFNRLAEQTKPSAVARLLKSQLNNIESSQYVLTNAKIN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | QQSSAATSDELQKILFSPEAIKKMATECDLGRHHWMRADNAISVRPLVPEVTHGRIASFFKSGYDAGELSSKGYMSVPQVLCAVTRTVSTDAEGSLRIYLADLGDKELSPIDGQCVTLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIERHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLKSQLNNIESSQYVLTNAKIN | |||||||||||||||||||
1 | 6h2bA1 | 0.10 | 0.07 | 0.73 | 1.08 | CEthreader | ------ARSDVNAITVLNGSDFLTTVKVRGSNNLTDSKSRILVKQPISA--------SSFLGTRISGLSQFWERYRWHKAAVRYVPAVPNTLACQLIGYIDDPLDDPNVILDQVGARQWNFSDTTTIPLIVRRLYYTGQDKEFSQQGVFYLLQVTTLLNDLISGSLYLDWVCGFSMPQINP------------------------------------------------- | |||||||||||||
2 | 5npxL2 | 0.10 | 0.07 | 0.67 | 1.08 | EigenThreader | -------------IYNLGSPG-------QTLNRWMGFGQGVIKSMPLAIMNMTNAYLS-------------LWRYFHGDLVFEVNKMSSPYIKSTVTFFIGFGGSFQPELEDFPNKLVQFSEVQEELKFTRFLTAWSTQVDPADGCPYLYAMVHTASIVGDFNLGVTLTNFAGIGCNPGIQGARLLG------------------------------------------- | |||||||||||||
3 | 6izlA | 0.06 | 0.03 | 0.63 | 0.75 | DisCoVER | MTRVVG-----------------S--DY----LGVVSVAGKVRKVLSV----S---P--SSFTRLTQMSDLWERYVFRQFRVRYVPSVPNTLACQVMVYQDTDPQDDPATQ-TGSQQWNFN-SAKVIHL-ANQLYYTGPVPRFNQQGVVYFIQVSQALDMMECGSLYVDWVI-DFQTPQVN------------------------------------------------- | |||||||||||||
4 | 5lq3A | 0.05 | 0.03 | 0.69 | 0.67 | DEthreader | ---VIIVMYTLPMIAVP-VSLLGTFAGLLFTLALIL-------IGIV-------VDDAIIVVENIDRILAQAMQEVSPVIVLCFSGIQLKGASFAGMVFLIL--AAQYERWLIPLAVV-------------------------------AVPAVFSFSNDIYFTGLLG-----EFMEERAAARFRIMLAFGV-------GAGSASRHSLGTGLIGGMAAST--------- | |||||||||||||
5 | 6izlA | 0.10 | 0.07 | 0.73 | 1.08 | CEthreader | -------NMRQMHNGMTRVVGSDYLGVVSVAGNPADAAAKVRKVLSVSP--------SSFPGTRLTQMSDLWERYVFRQFRVRYVPSVPNTLACQVMVYQDTDPQDDPTAIKDTGSQQWNFNSAKVIHLAKRSLYYTGPVKEFNQQGVVYFIQVSQALADMECGSLYVDWVIDFQTPQVNPSA----------------------------------------------- | |||||||||||||
6 | 5npxL | 0.10 | 0.08 | 0.84 | 1.03 | EigenThreader | LSLDDTSS------VKGS----------LLDTRFVVIPAGGNELLNSNNFRAAAALAH--------------THIIEGQIKCVCTINLPENTGCCLALCVNSSNRGQFSTIGSQDRMLWNPACSKNSTFTFNPNWSLEFLRRTKFHISVVCVSGWSAQPTDLVMTMDFFVANVPCVPRIYNLGSPGQTLWLSFGQGVSAIGGMTNAYLS-------LWRYFHGDSSPYIK | |||||||||||||
7 | 6izlA | 0.12 | 0.07 | 0.61 | 0.32 | HHpred | -------------------------------YLGVVSVAKVRKVLSVSPSSFPGTRLTQMSDLWER--------YVFRQFRVRYVPSVPNTLACQVMVYQDDPQDDPTAIKDADALRATAQTGSQQWNFVIHLAKRSDNVKENPRVVYFIQVSNGKPLTAMECGSLYVDWVIDFQTPQVN-------------------------------------------------- | |||||||||||||
8 | 6izlA | 0.09 | 0.05 | 0.57 | 0.78 | MRFsearch | ---------------------------------GVVSVAKVRKVLSVSPSSFPGTRLTQMSDLWER--------YVFRQFRVRYVPSVPNTLACQVMVYQDTDPSQQWNFNSAKVIHLAKRSDNQLYYTG---PVKENPRFNQQGVVYFIQVSQALDTADMECGSLYVDWVIDFQ------------------------------------------------------- | |||||||||||||
9 | 4imhA1 | 0.12 | 0.09 | 0.71 | 0.53 | FFAS-3D | ----SHSPAELYRAWQDLRAARDAAALLQVSEGELVASRVGIDAVRLRPD--WAALLPALGE------------------------------LGPIMALTRNEH-----CVHERKGPYRSANGQMGLVVSPDIDLRLFLGG-WNAVFAIAEET-----ARGTQRSIQVF-------------DQQGVAVHKVFLAEA---SDVRAWEPLVERLRAAEQDAVLALHE---- | |||||||||||||
10 | 6le0A | 0.11 | 0.10 | 0.84 | 0.54 | SPARKS-K | RFTLPAHSPALAALVPEFLDLARAASDEERDLAVWENLTESLDYRF-----------------ANPPVHGPGDWDTYDSRFVD-----PAGVEGTLQGTGRILYERSSDAHLYYREQLTFPDGTAQTAGWVD---GTAILGGAWQRFPILGSGGRYGS--------IGLRSFQPTPEA---PHSLYRHLVLREIPGGHGLTDPEEIDAALSLLGAFVGPSVNPATGNGRL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |