Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | QQSSAATSDELQKILFSPEAIKKMATECDLGRHHWMRADNAISVRPLVPEVTHGRIASFFKSGYDAGELSSKGYMSVPQVLCAVTRTVSTDAEGSLRIYLADLGDKELSPIDGQCVTLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIERHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLKSQLNNIESSQYVLTNAKIN |
1 | 6h2bA1 | 0.10 | 0.07 | 0.73 | 1.08 | CEthreader | | ------ARSDVNAITVLNGSDFLTTVKVRGSNNLTDSKSRILVKQPISA--------SSFLGTRISGLSQFWERYRWHKAAVRYVPAVPNTLACQLIGYIDDPLDDPNVILDQVGARQWNFSDTTTIPLIVRRLYYTGQDKEFSQQGVFYLLQVTTLLNDLISGSLYLDWVCGFSMPQINP------------------------------------------------- |
2 | 5npxL2 | 0.10 | 0.07 | 0.67 | 1.08 | EigenThreader | | -------------IYNLGSPG-------QTLNRWMGFGQGVIKSMPLAIMNMTNAYLS-------------LWRYFHGDLVFEVNKMSSPYIKSTVTFFIGFGGSFQPELEDFPNKLVQFSEVQEELKFTRFLTAWSTQVDPADGCPYLYAMVHTASIVGDFNLGVTLTNFAGIGCNPGIQGARLLG------------------------------------------- |
3 | 6izlA | 0.06 | 0.03 | 0.63 | 0.75 | DisCoVER | | MTRVVG-----------------S--DY----LGVVSVAGKVRKVLSV----S---P--SSFTRLTQMSDLWERYVFRQFRVRYVPSVPNTLACQVMVYQDTDPQDDPATQ-TGSQQWNFN-SAKVIHL-ANQLYYTGPVPRFNQQGVVYFIQVSQALDMMECGSLYVDWVI-DFQTPQVN------------------------------------------------- |
4 | 5lq3A | 0.05 | 0.03 | 0.69 | 0.67 | DEthreader | | ---VIIVMYTLPMIAVP-VSLLGTFAGLLFTLALIL-------IGIV-------VDDAIIVVENIDRILAQAMQEVSPVIVLCFSGIQLKGASFAGMVFLIL--AAQYERWLIPLAVV-------------------------------AVPAVFSFSNDIYFTGLLG-----EFMEERAAARFRIMLAFGV-------GAGSASRHSLGTGLIGGMAAST--------- |
5 | 6izlA | 0.10 | 0.07 | 0.73 | 1.08 | CEthreader | | -------NMRQMHNGMTRVVGSDYLGVVSVAGNPADAAAKVRKVLSVSP--------SSFPGTRLTQMSDLWERYVFRQFRVRYVPSVPNTLACQVMVYQDTDPQDDPTAIKDTGSQQWNFNSAKVIHLAKRSLYYTGPVKEFNQQGVVYFIQVSQALADMECGSLYVDWVIDFQTPQVNPSA----------------------------------------------- |
6 | 5npxL | 0.10 | 0.08 | 0.84 | 1.03 | EigenThreader | | LSLDDTSS------VKGS----------LLDTRFVVIPAGGNELLNSNNFRAAAALAH--------------THIIEGQIKCVCTINLPENTGCCLALCVNSSNRGQFSTIGSQDRMLWNPACSKNSTFTFNPNWSLEFLRRTKFHISVVCVSGWSAQPTDLVMTMDFFVANVPCVPRIYNLGSPGQTLWLSFGQGVSAIGGMTNAYLS-------LWRYFHGDSSPYIK |
7 | 6izlA | 0.12 | 0.07 | 0.61 | 0.32 | HHpred | | -------------------------------YLGVVSVAKVRKVLSVSPSSFPGTRLTQMSDLWER--------YVFRQFRVRYVPSVPNTLACQVMVYQDDPQDDPTAIKDADALRATAQTGSQQWNFVIHLAKRSDNVKENPRVVYFIQVSNGKPLTAMECGSLYVDWVIDFQTPQVN-------------------------------------------------- |
8 | 6izlA | 0.09 | 0.05 | 0.57 | 0.78 | MRFsearch | | ---------------------------------GVVSVAKVRKVLSVSPSSFPGTRLTQMSDLWER--------YVFRQFRVRYVPSVPNTLACQVMVYQDTDPSQQWNFNSAKVIHLAKRSDNQLYYTG---PVKENPRFNQQGVVYFIQVSQALDTADMECGSLYVDWVIDFQ------------------------------------------------------- |
9 | 4imhA1 | 0.12 | 0.09 | 0.71 | 0.53 | FFAS-3D | | ----SHSPAELYRAWQDLRAARDAAALLQVSEGELVASRVGIDAVRLRPD--WAALLPALGE------------------------------LGPIMALTRNEH-----CVHERKGPYRSANGQMGLVVSPDIDLRLFLGG-WNAVFAIAEET-----ARGTQRSIQVF-------------DQQGVAVHKVFLAEA---SDVRAWEPLVERLRAAEQDAVLALHE---- |
10 | 6le0A | 0.11 | 0.10 | 0.84 | 0.54 | SPARKS-K | | RFTLPAHSPALAALVPEFLDLARAASDEERDLAVWENLTESLDYRF-----------------ANPPVHGPGDWDTYDSRFVD-----PAGVEGTLQGTGRILYERSSDAHLYYREQLTFPDGTAQTAGWVD---GTAILGGAWQRFPILGSGGRYGS--------IGLRSFQPTPEA---PHSLYRHLVLREIPGGHGLTDPEEIDAALSLLGAFVGPSVNPATGNGRL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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