Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | VMNNYFGIGIDADLCLDFHNAREENPNKFNSRLRNKGVYVKMGLRKMVGRKMCKDLHKAIRLEVDGKLVELPQLEGIIILNILSWGSGANPWGPEKDDQFSKPNHWDGMLEIVGVTGVVHLGQIQSGLRGAMRIAQGGHIKINLKSEIPVQVDGEP |
1 | 3vzdA2 | 0.14 | 0.12 | 0.85 | 1.17 | DEthreader | | MLVLSLAWGFIADVDLESEKYR---R--L----GEM-RFTLGTFLRLAA---LR-TYRGRLAYLPWTVVPDEDFVLVLALLHSHLGEMFAA--PM------GRC-AAGVMHLFYVRAVMLLRLFLARHYCYLVYVPVVAFRLEPKDKGVFAVDGEL |
2 | 3vzdA | 0.13 | 0.11 | 0.85 | 1.17 | DEthreader | | MHVLSLAWGFIADVDLESE-KY------RR-L-GEM-RFTLGTFLRLA-AL--R--TYRGRLAYLWTVVPDEDFVLVLALLHSHLGEMFAA-P-------MGRC-AAGVMHLFYVRVSMLLRLARHEYECPLVYVPVVAFRLEPKDKGVFAVDGEL |
3 | 3vzdA2 | 0.15 | 0.13 | 0.85 | 1.67 | HHpred | | FSVLSLAWGFIADVDLESEK--Y--------RRLGEMRFTLGTFLRLAALR-----TYRGRLAYLHTVVPDEDFVLVLALLHSHLGSEMFAA--------PMGRCAAGVMHLFYVRAVSRAMLMEKGRHPYLVYVPVVAFRLEPKDKGVFAVDGEL |
4 | 4werA2 | 0.17 | 0.13 | 0.75 | 1.48 | DisCoVER | | ---NVVAIG-T----------------IKLGKLAYFISGAKHLA--NA-------QTYPFHLSLDQKEQTIE-SSTVLVGLTNSIGGFETLLP------E--AQVDDGKLHLVYLKDLWDAVKALKGVTDNLVYLTFKEGTISLENELTTNVDEG- |
5 | 3vzdA | 0.15 | 0.13 | 0.85 | 0.92 | MRFsearch | | -SVLSLAWGFIADVDLESEKYRR----------LGEMRFTLGTFLRLAALR-----TYRGRLAYLWTVVPDEDFVLVLALLHSHLGSEMFAA--------PMGRCAAGVMHLFYVRAGVLFLAMEKGRHPYLVYVPVVAFRLEPKDKGVFAVDGEL |
6 | 3vzdA2 | 0.12 | 0.10 | 0.87 | 1.44 | SPARKS-K | | FSVLSLAWGFIADVDLESEKYRRLGEM----------RFTLGTFLRLAALRTY---RGRLAYLPHWTVVPDEDFVLVLALLHSHLGSEMFAAPMGR--------CAAGVMHLFYVRARAMLLRLFLAMEKGLVYVPVVAFRLEPDGKGVFAVDGEL |
7 | 3vzdA | 0.15 | 0.13 | 0.85 | 1.32 | MAPalign | | -SVLSLAWGFIADVDLESEKYRRL----------GEMRFTLGTFLRLA-----ALRTYRGRLAYLWTVVPDEDFVLVLALLHSHLGSEMFAAP------MGRC--AAGVMHLFYVRAGVLFLAMEKGRHPYLVYVPVVAFRLEPKDKGVFAVDGEL |
8 | 3vzdA2 | 0.13 | 0.11 | 0.87 | 1.52 | CEthreader | | FSVLSLAWGFIADVDLESEKYRRLGE----------MRFTLGTFLRLAA---LRTYRGRLAYLPHWTVVPDEDFVLVLALLHSHLGSEMFAA--------PMGRCAAGVMHLFYVRAGVSRAMLLRLFCPYLVYVPVVAFRLEPKDGGVFAVDGEL |
9 | 2p1rA2 | 0.21 | 0.16 | 0.78 | 1.04 | MUSTER | | CFIN-ATGGFGTRIT------------------LGGVSYLIHGL--RDTLTPD-----RCEIRGENFHWQG-DALVIGIGNGRQAGGGQQLCPT--------ALINDGLLQLRIFTGEELLPALFSTLNPNIIDGASAWFDIHAPHEITFNLDGEP |
10 | 3vzdA2 | 0.15 | 0.13 | 0.85 | 3.09 | HHsearch | | FSVLSLAWGFIADVDLESEK--Y--------RRLGEMRFTLGTFLRLAALR-----TYRGRLAYLHTVVPDEDFVLVLALLHSHLGSEMFAA--------PMGRCAAGVMHLFYVRAVSRAMLLEKGRHPYLVYVPVVAFRLEPKDKGVFAVDGEL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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