Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | ESKQKKHEEFDERAKQGETVVPDGTSGKNLEAQEHLAEGRSRGGQTRKKQLGSEGYHEMGTKGGQTRKEQIGTAGYQEMGRKGGLSTMDKSGGEHAAEEGIDINESN |
1 | 5cwcA1 | 0.05 | 0.03 | 0.61 | 0.72 | DisCoVER | | -------------------------------------LRERLVKICVENAKGDDTEEAREAAAFELVRGIDSSEVLELAIRLIK-ECVENAQREG--DISACRAA-- |
2 | 1y6zB | 0.07 | 0.07 | 0.96 | 1.00 | DEthreader | | SLTEDYYSFYKNAPGSLPWLMFDEESRGKFSLRGIVLKSISM-MKGLKGDKWTKFLNTFGKYLK-IGVVEDK-ENQEEIASLDLDSYIENIDVL-FSLIDEFLTLDV |
3 | 6tnfB3 | 0.04 | 0.04 | 1.00 | 0.46 | CEthreader | | SLHVLYKSPVSLLRELAQDIHACLGDIDQDVEIESRSHFAIVNVKTAAPTVCLLVLGQADKVLETALPAGSCVDSLLRSLSKTYAILTSLIKHYIQACRSTSNTVPG |
4 | 1slyA | 0.07 | 0.07 | 1.00 | 0.48 | EigenThreader | | RIRLAMKAFTRQMAAVAFASVARQDAENARLMIPSLAQAQYWQADLLLERGREAEAKEILHQLMQRVRELMYWSEWANLVKSKARYAFNNQWWDLSVQATIAGKLWD |
5 | 3ecpA2 | 0.14 | 0.06 | 0.40 | 0.18 | HHpred | | --------------------------------------DKGKRKRKEKAGSLQWAYMAIARLGGFMDSKRTGIASWGALWE-------------------------- |
6 | 5cwjA | 0.11 | 0.09 | 0.85 | 0.78 | MRFsearch | | --AIRAVAEIAKEAQDSEVL---------EEAIRVILRIAKESGSEEALRQAIRAVAEIAKEAQDPRVLEEAIRVIRQIAEESGSEEARRQAERAEEEIRRR----- |
7 | 6u1sA2 | 0.18 | 0.17 | 0.92 | 0.43 | FFAS-3D | | ERRERAKSARDEIKRFAEDARKKIEVALLKRSREYLKKVALIQLVILLSWRSEELIRELEEKGAARMKQQHMTAYLQEIISKSVIALLLLQQNQLNLE--------- |
8 | 4j29A | 0.16 | 0.15 | 0.96 | 0.91 | SPARKS-K | | RILEELLEVVLKSDPNVKTVRTD----DKEKVKEEIEKARKQGRPRGATEEVVRDIVEYAQKEGIVDQDQEELERIYEQLKKDGVDVRVTDNEDEAKKRLKELLEKV |
9 | 4wceI | 0.24 | 0.10 | 0.43 | 0.81 | CNFpred | | --------------------------GSRKERNRVGRGVATGNGKTS----------GRGHKGQKARSGGGVR-----PGFEGGQLP-------------------- |
10 | 2gq8A | 0.06 | 0.06 | 0.87 | 0.83 | DEthreader | | ---PPMTGTQTGHVGTPDNVDNGSDEPG-FV----AANGYINQIDANNRGGSLENRLRFLDEVVAALVDAIGAERV-GVRY-LHI-AEVDDAPD-TP--VSFKRRAD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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