Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | TQSRIVEELSGKLTDLQPALLKTIPLNYFSELARSNMTAVGDYLRVKRLMDAFRGTKHAEADAVAQEWLKYTRLGFAGKDKAKAQVLADLMHDATLAGVDPSQVDEETRAKAGYQHLRKRYMELPPKGRELFQKVRDAYREQAEQLDDILLDNVRKAQEIAQQNAEDRYKRTLQRIKDAGLTGIDRK |
1 | 4uosA | 0.13 | 0.12 | 4.05 | 0.94 | SPARKS-K | | ---GDNEEVKKMLEKMIEEIKKMLAIKKVKEMLEKMIKEIKKMLEILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKEL---------------DNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVG----- |
2 | 6djlB | 0.16 | 0.15 | 4.98 | 1.21 | FFAS-3D | | -STDDINRRETELEDARQKFRSVLVLDELVKKIGKAVEDSKPYWEARRVARQAQLEAQKATQDFAKETISLAEQRLLEDDKRQFDAWQEMLNHATQR--VMEAEQTKTRSELVHKETAARYNAAMGRMRQLEKKLKRAYFELKAKYYVQLEQLKKTVDQAKLTLAKGEYKKNLEMISDE-------- |
3 | 4uetA | 0.10 | 0.07 | 2.80 | 0.35 | HHpred | | KYEDIPADYRDLMPPEARDFLQNLSKTVLKEVFKA--GPYKNTEESIAALKKKSPELGAKVEKLHAMVKSIAA-----LGPEAKGFAEKSIEIARKARYTGNEP-TKDDLKASVKEVLKLYKAMSDAGKADFGKQ---FPFLAKVFESGKAAKFAGE------------------------------ |
4 | 4uosA | 0.10 | 0.10 | 3.55 | 0.93 | MUSTER | | DNEEVKKMLEKMIEEIKKMLEKA--IKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKI-----LKKAKEMAEKILKKVKE-LGVDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEN-SEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKV |
5 | 2yfaA | 0.12 | 0.12 | 4.12 | 0.72 | CNFpred | | NTLAKLDAFSKQQAYLATTFKNVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEV-DSVRLAQYQLISKARQQLLQVRID--SSANEQAALRQLDAALADTDNLKDARLQQFENAVLAYRDAVRQFRDAV-ANITTSRAEMTVQGADI-VKRSDALYQIQL------ |
6 | 1vt4I | 0.13 | 0.12 | 4.29 | 0.49 | HHsearch-2 | | HQYQYKDILSVFEDAFVDMPKSILSKEEIDHIIMSKDA-VSGTLRLFWTLLSKQEEMVKFVEEVLRINYKFLM-----SPIKTEQRQPSMMTRMYIEQDNQVFAKYNVSRLQPYLKLRQALLELRPAWVALKVQNCNSPETVLEMLQKLLYQIDPNWTSRNIKLRIHSIQAELRRLLKSKPYENCLL |
7 | 5cwmA | 0.12 | 0.12 | 4.17 | 0.95 | Neff-PPAS | | KALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRISEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKELRER- |
8 | 4uetA | 0.13 | 0.10 | 3.36 | 0.57 | HHsearch | | -------MGSSHH-HHHHSSGHMFKYEDIPADYRDLMPPARDFLQNL--------------------------------SDGDKTVLKEVFKAAALKKKSPELG---AKVEKLHAMVKSKIAALGPEAKGFAEKSIEIARGIKDDLKASVKEVLKLYKASDAGKADFGKQFFLAKVFESGAAKFAG- |
9 | 3u65B | 0.13 | 0.13 | 4.61 | 0.78 | SP3 | | GEREGIRKLKSSRPGQAAPLGAVFSCLGLSELAPDSGIYTLSVPFLIQNEKDLERVLHELREDLDRPFRAATRAPSSLDSSVLGTCFRICLAPLLKAGIDVHLFTWATGFYRYISYADGSWARIPDAMLQAATRVRQRLANNLETLDRECSNNIQKATPQEIQEWRTEFAADVKRIQARLPGMLNMT |
10 | 4uosA | 0.13 | 0.12 | 4.11 | 0.91 | PROSPECTOR2 | | GNEEVKKMLEKMIEEIKKMLEKA--IKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKIL----KKAKEMAEKILKKVKELGVDNEE--VKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGV-----G |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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