Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | NQQPTVTINFSENGELEQGDVLPYGLAERTFERLDREARAERDDPDRGRYYKTDFTVTYMMEGQLYEYNGRQDFGDGDGPLSDHIRGHAEYYRNDPQYQ |
1 | 5l9wB2 | 0.11 | 0.11 | 3.98 | 0.99 | SPARKS-K | | MYEQSRRMVFMEPG--TEKFVVDYEHFNQTVDTMIERARQELRSEGLEASFGLELDMLYGGQVNLKRMSSPLLHIRTAEDALKVYQAFETEFSEAFSPL |
2 | 6hr7A2 | 0.11 | 0.09 | 3.29 | 0.54 | FFAS-3D | | --APVIKT----------ESVIDAVKLKEWIKENFQRIKEVAESTTRHG--KLIDINPILIVGRYVYPRFVYKTGDAMGMATEKACNFIEEELKKEN-- |
3 | 5h9uC2 | 0.20 | 0.15 | 4.85 | 0.22 | HHpred | | ----------------TSESVTPITLAHRLTMRLAEVRKTG-LLPYLRPDGKAQVTVVYE-GDKPLVVSAQHS---PEVE-QEQLREDLIEYLKDGE-- |
4 | 6cp0A2 | 0.14 | 0.13 | 4.47 | 0.95 | MUSTER | | -KSLKDKIVDSVLVQLDKDFNTKDGDRGQKFEDIKKLVLEEYKKIDSE------LQVDEDTYHQPLNLDYLENILDDNSTAKDWVYGIIGATTEADYWP |
5 | 5cioA | 0.11 | 0.10 | 3.61 | 0.57 | CNFpred | | --EHALLQFYPLQS-----DEAEGRWALRVLARLYAPRYFQRLRVERNVGYVVQCTFHRCT--HVEGLLFALQSPT---FTAEQLRQLTDEFLQQMHHE |
6 | 4hh7A | 0.15 | 0.10 | 3.41 | 0.39 | HHsearch-2 | | NNIGG-TIIFSDNPNNDLSQLITAKEASQLLGYFAHIYKRFPHRLEGIDHIYTGKTLFLTKESLEVFKK------------------------------ |
7 | 4oojA1 | 0.10 | 0.10 | 3.71 | 1.03 | Neff-PPAS | | -KSLRDKVKSTVLSHYKDEDRIDGEKKDEKLNELITNLQNELVKVKSDPQYS-KLSLSKDPRGKEINYDYLVNSVDNDSEIGDWIDTILDATVDSTVWV |
8 | 6b39A | 0.16 | 0.15 | 5.04 | 0.73 | HHsearch | | LLDESINLGWAE----EKTEGLYLTDIGRMLLQMKELLFGQRNVVASGFQHEKFFADTFNQQPIEEQPIYIVDMGCGDGTLLKRIYKIIKQFSARGKL- |
9 | 6cp0A2 | 0.14 | 0.13 | 4.47 | 0.75 | SP3 | | -KSLKDKIVDSVLVQLDKDFNTKDGDRGQKFEDIKKLVLEEYKKIDS------ELQVDEDTYHQPLNLDYLENTLDDNSTAKDWVYGIIGATTEADYWP |
10 | 3ly7A1 | 0.07 | 0.07 | 2.91 | 0.44 | PROSPECTOR2 | | SRILDIDINMVNKSCNSWSSPYQLSYAIGVGDLVATSLNTFSYNIDEPSSSGKTLSIAFVNQRQYRAQQCFMSIVITNGNQLAIQNDLLESLSKALNQP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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