Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | AFGGELGADLNLESLDVAQIMLAQGDDSETIRQATGWFTGIDGKWRFEIDDSQAEL |
1 | 5yiuA | 0.12 | 0.11 | 3.77 | 1.23 | SPARKS-K | | ---GAMDMSWTDERVSTLKKLWLDGLSASQIAKQLGGVTRNAVIGKVHRLGL---- |
2 | 1hcrA | 0.09 | 0.07 | 2.75 | 1.07 | Neff-PPAS | | ----------NKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYFPASSIKKRMN |
3 | 2x48A | 0.15 | 0.12 | 4.23 | 1.10 | SPARKS-K | | VQGVRYYVESEDDLVSVAHELAKMGYTVQQIANALGVSERKVRRYLES-------- |
4 | 2avuE1 | 0.10 | 0.05 | 1.98 | 0.43 | FFAS-3D | | ------SIVQEARDIQLAMELITLGARLQMLESETQ-------------------- |
5 | 5o1uA1 | 0.09 | 0.05 | 2.02 | 0.25 | HHpred | | ---FFRHSNADVRVFEDAYKLVKMGADAHFVAKEI--------------------- |
6 | 3bwxA | 0.13 | 0.12 | 4.36 | 0.75 | MUSTER | | GYVGQGRNFETWHAARALQESSGDDWDITQWLRYA-IVLGSSGRIAFDYDKIAEPF |
7 | 3eglA | 0.10 | 0.07 | 2.66 | 0.49 | CNFpred | | ------------AAAMAAARMAMDGASLQECYDIAVDTL---RSETWIYLHRIDEI |
8 | 3tj0A | 0.21 | 0.21 | 6.79 | 0.33 | HHsearch-2 | | VFAVERPIALSKQAVRRMLSMNIEGRDGNLLKMMNDSMTSFIGKKMFQISDKNKTN |
9 | 2avuE1 | 0.15 | 0.12 | 4.23 | 0.95 | Neff-PPAS | | --------VQEARDIQLAMELITLGARLQMLESETQLSRGRLIKLYKELRGSPPPK |
10 | 4wt3A1 | 0.16 | 0.16 | 5.32 | 0.60 | HHsearch | | SPIPTQFRSLDFEYAPLISSLYTDGFTPPTIEELTGISSIEQNRLIVEIRLLSTT- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|