Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | ASLRDTVKDYQDELRDGIAWVAFWKQGRSWNAEYFHLDMDDTLYPEDRSRLEEIKSIDPAAVILNGYYCGHLGEDMSLDELTAGVRYHYENSMNDIDG |
1 | 2x5gA | 0.17 | 0.12 | 4.03 | 0.81 | SPARKS-K | | ASLKEIIDELGKQAKEQRIVVQLNAVP-KIRYSTIHSQNNIGITPQDAEDLKLIAEFEKYSDFLNEYVKFTP-------------------------- |
2 | 2qq5A2 | 0.21 | 0.14 | 4.55 | 0.46 | FFAS-3D | | AACDKLAADCAHELRRGVSCVSLW-------PGIVQTELSSAETTELSGKCVVALATDPNILSL-------SGKVLPSCDLA---------------- |
3 | 5epdA1 | 0.16 | 0.14 | 4.74 | 0.26 | HHpred | | DGWKKVTAAVHK--KGGRIVLQLWHVGRISHVNLQGGAPSAIPRALELEELAGIVDDFRKAAAANGYLNMRTDTYGGMLEVTAAVAQEI--------- |
4 | 5npkb1 | 0.26 | 0.23 | 7.26 | 0.70 | MUSTER | | -KLADSSKSPEE-LVEGDSAGGSTKSGRDSRTQAI-LPLRGKILNVEKARLDRILNNNEIRQMITAFGTGI-GGDFDLAKA----RYHKIVIMTDADG |
5 | 5k2mA | 0.06 | 0.04 | 1.78 | 0.55 | CNFpred | | PEVEELSVKAWEAFGEGALAIDIFESE----KGLLVNEVN---PNMEFKNAARVTG-ADMAGKLVEYAVEVAKT------------------------ |
6 | 2pffB | 0.11 | 0.10 | 3.71 | 0.40 | HHsearch-2 | | TTPAELVGKFLGYVSSLVEPSKVG----QFDQVLNCLEFENYLEGNDIHALAAKLLNDKTKELIKNYITARIMAKRPFDKKSNSALFRGEGNAQLDDY |
7 | 3lg8A | 0.16 | 0.15 | 5.11 | 0.67 | Neff-PPAS | | DKLIKLIKDGAISLGGGELIVRLNKRDMELIDDSTLWNLEKEVENATKKVTV-LKKGEPV-DIAGGCIIGLKSLDNSLEAIFNRNLNVIRARITEKLF |
8 | 3au8A3 | 0.05 | 0.02 | 0.95 | 0.36 | HHsearch | | ------------------------------------------------------NFYPSNEIANNLFLNNKIK----YFDISSIISQVLESFNSQSE- |
9 | 1uayA2 | 0.20 | 0.15 | 4.90 | 0.64 | SP3 | | GGVVALTLPAARELAGGIRVVTVAP-------GLFDTPLLQGLPEKAKASLAAQVPF--------------PPRLGRPEEYAALVLHILENPM--LNG |
10 | 5uf5A3 | 0.06 | 0.05 | 2.22 | 0.44 | PROSPECTOR2 | | EKIDEQYHLFKGYVKDQP------------EESPFEGILPAEDQKILVKTMIDYAMPKLSSKVLQDKLSALSSSDVLTKTLLDSIDRIVKENEKL--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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