Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | RRQKALEELYSKQEIPKSMYDDMKRKLDSELLKLREEHAKLKSKLKNRLNEIEDQLAQIDKATISLKMSYISGELPETSYKNSMEILRQSKESYTLERDDIKKILDKLDGLDKEGIDIKPSP |
1 | 4wheA | 0.13 | 0.11 | 3.99 | 1.04 | FFAS-3D | | -----FADIVNANEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRAR-------- |
2 | 3na7A1 | 0.10 | 0.10 | 3.62 | 1.10 | Neff-PPAS | | PLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSERELRSLNIEEDKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALEL---- |
3 | 4tqlA1 | 0.12 | 0.11 | 4.02 | 0.81 | SPARKS-K | | RMEKLYKEMVELIQIERKIFQEVKQEVEKAIEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKKKNIDD-LKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIE--------- |
4 | 5nenA1 | 0.16 | 0.15 | 4.89 | 1.03 | FFAS-3D | | -RLLAVAEIIAL---QTQLFASRRQALQSEIDGYKQSMDGIRFQLQDSRGNKQIQLSSLREQMNSMKQLAADGYLPRNRYLEVQRQFAEVNSSIDETVGRIGQLQKQLLESQQR-------- |
5 | 4mt4A | 0.10 | 0.09 | 3.34 | 0.36 | HHpred | | -----------NVNLAKLNKDEAFVNYQNTLITAFGEIRYALVARKLQYDNAQASEQSYKRIYEIAKERYDIGEMSLQDYLEARQNWLNAAVAFNNIKYSYANSIVDVIKAFGGGFEQSEDT |
6 | 5xg2A | 0.16 | 0.15 | 4.93 | 0.87 | MUSTER | | ERAENLRRLVEEKRAEISELERRLSSITSQSFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEVA-------KRRINELDTLIERERGELAKLRGRIERLERKRDKLKKALENPEARE |
7 | 4tqlA | 0.13 | 0.12 | 4.28 | 0.65 | CNFpred | | --VQELEKARDR---MEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGGDMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEE |
8 | 3jbhA | 0.18 | 0.16 | 5.07 | 0.38 | HHsearch-2 | | DELKALEEKLKKALESLEKEEKVRKDIEVQNVKLLQEKNDLFLQLEERLTKAISMKNDLEGQVQELQERLS-------REEDAHSNLSSVRKKLDGEISNLKKEIEDLQLVI---------- |
9 | 5t4oI | 0.13 | 0.13 | 4.54 | 0.89 | Neff-PPAS | | KRQKEIADGLASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIVAQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL |
10 | 4kisA2 | 0.12 | 0.06 | 2.02 | 0.65 | HHsearch | | --------------------------------------------------SLNEKLKIEHAKKKRLFDLYINGSYEVSELDSMMNDIDAQINYYEAQIEANEELKKNK-------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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