Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | RFLDAFGVKPNSAGYYRDASGGVVTISRDLFSQAGATPSFSAGRYALMIAAAIQDPDEIWAAWALAGNASPMLQRTYIRRFDMGKDGNLLVQFVWTKKGWRAVTSFTATDAEIEALRVGAMLY |
1 | 6ideA1 | 0.08 | 0.08 | 3.17 | 0.83 | SPARKS-K | | LEQISLFKQLPGYWGCKDLNSVFVYANQAYGELIGDCIGRTDFEMPSPTAACAAEFQQQDRYVIETG---HSVKVLDIHPYPDGHWHAHIFTKTPWRDKIQGTIFFGQDLTIPKTLLRKQLSV |
2 | 4ywzA | 0.05 | 0.04 | 1.94 | 0.56 | FFAS-3D | | NLLSEYANQEIGEIRFIDKDQIIIATTKQSNRSLINQKANDSS-----VQKALSLGQSNDHLILKDYGGGKDRVWVYNIPVKVDKKVIGNIYIESK---------INDVYNQLNNINQ----- |
3 | 1v74A | 0.15 | 0.11 | 3.83 | 0.31 | HHpred | | ---------------LNDPLD-SGRFSRKQLDKKGISTRETLTKFRDAIEEHLSDKDTVEKGTYRREKGSK-------VYFNP--NTMNVVIIKS--NG-EFLSGWKINDNGRIYLETGEL-- |
4 | 1vw1A | 0.10 | 0.10 | 3.63 | 0.67 | MUSTER | | YLSMVYNGDIPTINYKAASSDLKIYISPKLRIIHNGYEG-QKRNQCNLMNKYGKLGDKFIVYTSLGSSNKLMFYPVYQYSGNTSGLNQGRLLFHRDTTYPSKVEAWIPGAKRSLTNAAIGDDY |
5 | 4xbyA | 0.11 | 0.09 | 3.20 | 0.65 | CNFpred | | KLIEYF----AEDTMYQNMPLPPAYGR------------DAVEQTLAGFFTVVSDAVETFHIGSSN--GLVYTERVDVLRALP-YNFSILGVFQLTEGKITGWRDYFD-LREFEEAV------ |
6 | 1v74A | 0.15 | 0.11 | 3.83 | 0.56 | HHsearch-2 | | ---------------LNDPLD-SGRFSRKQLDKKGISTRETLTKFRDAIEEHLSDKDTVEKGTYRREKGSK-------VYFNPN--TMNVVIIK--SNG-EFLSGWKINDNGRIYLETGEL-- |
7 | 6d34A | 0.06 | 0.06 | 2.50 | 0.80 | Neff-PPAS | | ASYAGFRDRDIEGILSGMHPDVEWVHPEGMGKYGLGGTKLGHAGIKEFLAHVPTVLGGMRLAPREFIEQGDRVVVFGTREVTSLRGLDFVHSWTMRDGKATRMEDIFDTVAFHELIES----- |
8 | 1v74A | 0.14 | 0.11 | 3.61 | 0.54 | HHsearch | | ---------------LNDPLD-SGRFSRKQLDKKGISTRETLTKFRDAIEEHLSDKDTVEKGTYRREKGSK-------VYFNPN--TMNVVIIKS--NG-EFLSGWKINADGRIYLETGEL-- |
9 | 6d34A | 0.06 | 0.06 | 2.48 | 0.78 | SP3 | | ASYAGFRDRDIEGSGMHP--DVEWVHPEGMGKYGLGGTKLGHAGIKEFLAHVPTVLGGMRLAPREFIEQGDRVVVFGTREVTSLRGLDFVHSWTMRDGKATRMEDIFDTVAFHELIES----- |
10 | 1s5aA | 0.06 | 0.05 | 2.20 | 0.51 | PROSPECTOR2 | | NTLRKFAYLEKDKSVFEFPYAP----------EGSPKRIEGKAAIYDYIKDYPKTAPTVYR---SADSNTVIAEFQCDGHVIETGLPSYISVIETRDGRIVRYRDYW-NPLVVKEAFGGSFLQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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