Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | GRSTKFWRHWCRNTPTQHAEINCLEHDFKKLKFRPSVHCSITWFLSWSPCGKCCQSIVEFLRAHPSVTLKIKAAWLFRHMDERNRQGLRNLMESGVALYIM |
1 | 3vm8A | 0.34 | 0.34 | 10.08 | 1.75 | SPARKS-K | | RRSVVSFRNQVDSETHCHAERCFLSWFCDDIL-SPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLYYFQYPCYQEGLRSLSQEGVAVEIM |
2 | 3vm8A | 0.31 | 0.31 | 9.28 | 1.69 | FFAS-3D | | RSVVSWKTGVVDSETHCHAERCFLSWFCDDI-LSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLYYFQYPCYQEGLRSLSQEGVAVEIM |
3 | 6bwyA | 0.31 | 0.31 | 9.27 | 3.47 | HHpred | | NDTWNQRRGFLANQAPRHAELCFLDVIP-FWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIKTARIYD-DQGRAQEGLRTLAEAGAKISIM |
4 | 3vm8A | 0.34 | 0.34 | 10.08 | 2.15 | MUSTER | | RRSVVSFRNQVDSETHCHAERCFLSWFCDDI-LSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLYYFQYPCYQEGLRSLSQEGVAVEIM |
5 | 3wusA | 0.33 | 0.33 | 9.80 | 1.59 | CNFpred | | HSPVSWKRGVFRNQTHCHAERCFLSWFCDDIL--PNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLYYFWDTDYQEGLRSLSQEGASVEIM |
6 | 6bwyA | 0.31 | 0.31 | 9.27 | 14.41 | HHsearch-2 | | NDTWNQRRGFLANQAPRHAELCFLDVIP-FWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIKTARIYD-DQGRAQEGLRTLAEAGAKISIM |
7 | 5w09A | 0.32 | 0.32 | 9.54 | 2.34 | Neff-PPAS | | ATSFSLDFGYLRNKNGCHVELLFLRYISDW-DLDPGRCYRVTWFTSWSPCYDCARHVADFLRGNPNLSLRIFTARLYFCERKAEPEGLRRLHRAGVQIAIM |
8 | 6bwyA | 0.31 | 0.31 | 9.27 | 23.06 | HHsearch | | NDTWNQRRGFLANQAPRHAELCFLDVIP-FWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIKTARIYD-DQGRAQEGLRTLAEAGAKISIM |
9 | 4p9cA | 0.22 | 0.19 | 5.93 | 1.00 | PROSPECTOR2 | | HTNCCELEDGSTNPFVLHAEQNALVKMAK----SSESIDGSELFCTHSPCPDCSKMIAQA-----------GVKKVYYRNEYRITDGIDVLQQLGVEVEKM |
10 | 2mzzA | 0.31 | 0.29 | 8.68 | 1.21 | SAM | | -----LDAKIFRSEDKYHPEMRFLSLVSK--WLHRDQEYEVTWYISWSPCTKCARDMATFLQENTHVTLTIFVARLYYAWDPDYQEALRSLAQAGATIKIM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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