Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | DKDDHAEIKFIDDNKDPFEITDLLIKNSPCHECSEKLLKHFEDLNNKPTIHVGRIWHLYDSDDDNGIIELLKDEFDIIVWEDLHSLICT |
1 | 5k81A | 0.17 | 0.17 | 5.55 | 1.71 | SPARKS-K | | KAKYHPEMRFLRWFHKDQEYKVTWYVSSPCTRCANSVATFLAKDPKTLTIFVARLYYFWKPDYQQALRILAEAGATMKIMNYNEFQDCW |
2 | 5w3vA | 0.22 | 0.21 | 6.75 | 1.09 | FFAS-3D | | KKEDHAEIRFINEDETQCYQVTCYLTWSPCPSCAGELVDFIKAHRHNLRIFASRLYYHWHPNYQEGLLLLCGSQVPVEVMGLPEFTDC- |
3 | 6bwyA | 0.19 | 0.19 | 6.15 | 2.66 | HHpred | | QAPRHAELCFLDVIPFLQDYRVTCFTSSPCFSCAQEMAKFISKNKHVLCIKTARIYD-DQGRAQEGLRTLAEAGAKISIMTYSEFKHCW |
4 | 5w09A | 0.17 | 0.17 | 5.55 | 1.54 | MUSTER | | KNGCHVELLFLRYIPGRCYRVTWFTSWSPCYDCARHVADFLRGNPNSLRIFTARLYFCERKAEPEGLRRLHRAGVQIAIMTFKDYFYCT |
5 | 5k81A | 0.17 | 0.17 | 5.54 | 1.56 | CNFpred | | KAKYHPEMRFLRWFH-DQEYKVTWYVWSPCTRCANSVATFLAKDPVTLTIFVARLYYFWKPDYQQALRILAEAGATMKIMNYNEFQDCW |
6 | 6bwyA | 0.19 | 0.19 | 6.15 | 1.96 | HHsearch-2 | | QAPRHAELCFLDVIPFLQDYRVTCFTSSPCFSCAQEMAKFISKNKHVLCIKTARIYD-DQGRAQEGLRTLAEAGAKISIMTYSEFKHCW |
7 | 5w09A | 0.16 | 0.16 | 5.24 | 2.02 | Neff-PPAS | | -NGCHVELLFLRYIPGRCYRVTWFTSWSPCYDCARHVADFLRGNPNSLRIFTARLYFCERKAEPEGLRRLHRAGVQIAIMTFKDYFYCW |
8 | 5k81A | 0.17 | 0.17 | 5.54 | 3.13 | HHsearch | | KAKYHPEMRFLRWFHHHQEYKVTWYVSSPCTRCANSVATFLAKDPKVLTIFVARLYYFWKPDYQQALRILAEAGATMKIMNYNEFQDC- |
9 | 2nytA | 0.17 | 0.17 | 5.55 | 0.67 | PROSPECTOR2 | | HAAAHAEEAFFNTILPALRYNVTWYVSSPCAACADRIIKTLSKTKNRLLILVGRLFMWEEPEIQAALKKLKEAGCKLRIMKPQDFEYVK |
10 | 6bwyA | 0.20 | 0.19 | 6.09 | 1.22 | SAM | | ----HAELCFLDVIPFDQDYRVTCFTSSPCFSCAQEMAKFISKNKHVSCIKTARIYD-DQGRAQEGLRTLAEAGAKISIMTYSEFKHC- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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