Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | ILTKDIKSLIVTNALTKAGIFEKEDKLFQDRADWAEKIRIEAIGGKNMEQGIQDIMSEIEKLTTKLPESLRTNITPINRSNCVGINLAGSRVYAYFNGARERFKYPDSRKHITKITPDNTTLLADNPLVNEFYELEKRHDELKSQRADITNNVEAVLLKVRSVKRLLEEWPEAAELLPKDMGKAAPVPAVRREALNTLIGLP |
1 | 4nx9A1 | 0.10 | 0.08 | 2.90 | 0.74 | SPARKS-K | | ----NGLNVATKNANDGISLAQTAEGALQQSTNILQDLSLQSANGSNSDSERTALNGEVKQLQKELDRISNTTTFLDGSFGVASFQVGNEIISVGIDESAESLNG---NDTV-------AKIDISTA--KGAQSAVLVIDEAIKQIDAQRADLGAVQNRFNTINNLKNI--------------------------------- |
2 | 3l4qC | 0.11 | 0.08 | 3.04 | 0.89 | FFAS-3D | | ---EAVGAQLKVYHQQYQDKSREYDQLYEEYTRTSQELQMKRTAIEAFNETIKIFEEQGQTQEKSSKEYLERFRREGNE-------------------------------------------KEMQRILLNSERLKSRIAEIHESRTKLEQELRAQASDNREIDKRMNSLPDLMQLRKIRDQYLVWLTQARQKKINEWLGI- |
3 | 4y66C | 0.15 | 0.12 | 4.17 | 0.29 | HHpred | | -TSLDEKKERLLEEMLKGEIYS-NKTIETLSKP-T------GISS-----------MVIKNVLQALVN-----------EDLVDTDIGASTYYWCFASKRSQAARTAQTNFIEELKV-GRETEERSSLLKEKLALQVKLEEQRGTFRDLLKVAQKLRNYTDIAKQEANLWTDNIFCLQKYMLT--KLQ-MDKKTVSTALGIT |
4 | 5owvC | 0.13 | 0.12 | 4.30 | 0.85 | MUSTER | | LDTTVLKEKFVKRKILN--LCEILEDENQLFVGIFDRLLNQFQSEKHLLLAYENFLKEIEILNHQILEQLKSISERISSEIFASVKEKDAYFYKESKGFLKKDLYTRYDYKAPYISSDDAF----LAMFYNSDVMSKEFKKIKNELYKSFEEIKMKLKDFNILEREILLFKAEFSNIQKDHIFQSDKNFSELRAFCNAS--- |
5 | 5j1iA | 0.11 | 0.09 | 3.24 | 0.65 | CNFpred | | -----SLSAIYLEKLKTISVIRGTQGAEEVLRAHEEQLKEAQA-VPATLPELEATKASLKKLRAQAEAQQPT-------FDALRDELRGAQEVGERL--QQRHGE---------------RDVEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQL---RYYRESADPLGAWLQDARRRQEQIQA-DSQAVREQLRQE |
6 | 1vt4I3 | 0.10 | 0.06 | 2.40 | 0.77 | HHsearch-2 | | --EYALHRSIVDHYNIPKTFDS---------D--------DLIPPYLDQYFYSHIGHHLKNIE--HPERMTLF-------------------RMVFLDFRFLE------QKIRHDSTANASGS---------------------ILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEELISKY--TDLLRIALMAEDE |
7 | 1ciiA2 | 0.10 | 0.10 | 3.81 | 0.94 | Neff-PPAS | | VLDAQQARLLGQQTRNDRAISEARNKLSSVTESLNTARNALTRAEQQLTQQKNTPDGKTIVSPEKFPSGDPRFAGTIKITTSAVIDNRANLNYLLSHSGLDYKRNILNDRNPVVTEDVEGDKKIYNAEVAEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEKENIRNQLSGINQKIAEEKRKQ |
8 | 6cfzD | 0.14 | 0.04 | 1.52 | 0.44 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------EAREAALLEGVRKINEVIEGMIGTLERAKGNMGTVSQTVTNATTLLNTWTRMLS---QTEH------------NQRLILN- |
9 | 3e58A | 0.09 | 0.08 | 3.19 | 0.71 | SP3 | | VLTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRDEYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFNRLQGFFDIVLSGEEFKESKPN-----PEIYLTALKQLNVQASRAEKGIAAGVAAVEVW------------AIRDNEFGDQSAAKGLLDSLTDVLDLI |
10 | 4uosA | 0.11 | 0.08 | 3.03 | 0.73 | PROSPECTOR2 | | GDNEEVKKMLEKMIEEKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDSEELAEKILKKAKEMAEKILKKVKELGV------------------------------------------------DNEEVKKMLEKMIEEIKKMLEKAEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKIGVG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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