Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | HLFHKPPAVVGEYPARGELYYVKGSNGSGKSTVPSWMAENDPQAYVVTHNGKVMLTVCPSFNIICVGKYDKSKSKGVDSLKDTEQMLFAVSITEQPEYIGYDVIFEGIIPATLLNTWIERLNRPSRRLVVLFLDTPKEVCLARVSSRNGGEDFKHDLVLEKWKRVNSHRERHKELFPNIPAGMMKSNGLTVDQAVS |
1 | 4gp6A | 0.14 | 0.12 | 4.01 | 1.17 | SPARKS-K | | --------SMKLTIPELSLVVLIGSSGSGKSTFAKKHF--------------------KPTEVISSDFCRGLVSDDENDQTVTGAAFDVLHYIVSKQLGKLTVVDATNVQESARKPLIEIAKDYHCFPVAVVFNLPEKVCQERNKNRTDRQ-VEEYVIRKHTQQLKKSIKGLQREG--FRYVYILNSPEEVEEVVF |
2 | 1zp6A | 0.19 | 0.15 | 4.94 | 1.58 | FFAS-3D | | ---------------GGNILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDLWGYIKH-----------GRIDPWLPQSHQQNRIQIAADVAGRYAKEGYFVILDGVVRP----DWLPAFTALARPLHYIVLRTTAAEAIERCLDRGGDSLSDPLVVADLHSQFADLGAFEH--------HVLPVSGKDTDQALQ |
3 | 5ochA | 0.20 | 0.17 | 5.38 | 2.69 | HHpred | | -CFSYPEVLKTLTLPPGKIVALVGQSGGGKTTVASLLERFYPTAGVVMLDGRDLRTLDGQVGFISQEPVLFGNIRFGKLEASDEEVYTAAREANAHEFEGYNTVVEGTLSGGQKQRLRALIKQP----TVLILDEATSAL----------DAESERVVQEALDRA----------SAGRT-VLVIAHRLS------ |
4 | 1ukzA | 0.14 | 0.13 | 4.52 | 1.44 | MUSTER | | ---------PAFSPDQVSVIFVLGGPGAGKGTQCEKLVKDYS--FVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIVPQEITLALLRNAISDNVKANKHKFLIDGFPRK--MDQAISFERDIVESKFILFFDCPEDIMLERLLERSGRSDDNIESIKKRFNTFKETSMPVIEYFETKSKVVRVRCDRSVEDVYK |
5 | 1qf9A | 0.16 | 0.15 | 4.90 | 1.20 | CNFpred | | -----------MEKSKPNVVFVLGGPGSGKGTQCANIVRDF-GWVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEIVPSIVTVKLLKNAIDAN-----QGKNFLVDGFPRNENNNSWEENMKDFVDTKFVLFFDCPEEVMTQRLLKRGGRSDDNIESIKKRFNTFNVQTKLVIDHYNKDKVKIIPAN-RDVNEVYN |
6 | 3a4lB | 0.13 | 0.10 | 3.56 | 0.51 | HHsearch-2 | | -------------MGDIMLIILTGLPGVGKSTFSKNLAKILSKNNVIVLGSDLIRESFPV--------WKEK------YEEFIKKSTRLIDSA---LK-NYWVIVDDNYYNSMRRDLINIAKKYNKNYAIIYLKASLDVLIRRNIERGE--KIPNE----VIKKMYEKFDEPGKKYKE-PFLIIDTTKDDFNEIAK |
7 | 2pclA | 0.16 | 0.15 | 4.93 | 1.25 | Neff-PPAS | | KVIRGYEILKGISVKKGEFVSIIGASGSGKSTLLYILGLLDPTEGKVFLEGKEVDYTN------EKELSLLRNRKLGFVFQFH-YLIPELTALENVIVPMLKMGKPKKEAKERGEYLLSELGGGEQQRVAIARALANEPILLFADEPTGNLD------SANTKRVMDIFLKINEGAELTHRTLEMKDGKVVGEITR |
8 | 3a4lB1 | 0.13 | 0.11 | 3.69 | 0.65 | HHsearch | | -------------MGDIMLIILTGLPGVGKSTFSKNLAKILSKNNVIVLGSDLIRESFPV--------WKEK------YEEFIKKSTRLIDSA---LK-NYWVIVDDNYYNSMRRDLINIAKKYNKNYAIIYLKASLDVLIRRNIERGE--KIPN----EVIKKMYEKFDEPGKKYDE-PFLIIDTTDIDFNEIA- |
9 | 1qf9a | 0.14 | 0.13 | 4.50 | 1.33 | PROSPECTOR2 | | -----------MEKSKPNVVFVLGGPGSGKGTQCANIVRDFGWV-HLSAGDLLRQEQQSGSKDGEMIATMIKNGEIVPSIVTVKLLKNAIDANQ----GKNFLVDGFPRNEENNNSWEENMKDFVDTKFVLFFDCPEEVMTQRLLKRSGRSDDNIESIKKRFNTFNVQTKLVIDHYNKFDKVKIIPANRDVNEVYF |
10 | 2awnB | 0.14 | 0.09 | 2.96 | 1.48 | SAM | | ----------NLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEITSGDLFIGEKRMNDTPRGVGMVFQSYALY--LAGAKKEVINQRVNQVAEVLQLAHLLDRKP---KALSGGQRQRVRTLVAEP----SVFLLDEPLSNL-------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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