Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | FQIAVKDALRKRGYECESEVGVAGFFIDLAVIDPKSPGRFLIGIECDGATYHSAKSVRDRDRLRQIILERLGWTIRRIWSPDWFKNPDAEIDTIVNAL |
1 | 3r3pA | 0.18 | 0.16 | 5.33 | 1.93 | SPARKS-K | | PERRVKEILDEMDIVYFTHHVVEGWNVAFYLGKK-------LAIEVNGVYWASKQKNVNKDKRKLSELHSKGYRVLTIED-DELNDIDKVKQQIQKFW |
2 | 3r3pA | 0.17 | 0.15 | 5.04 | 1.83 | FFAS-3D | | -ERRVKEILDEMDIVYFTHHVVEGWNVAFYLGK-------KLAIEVNGVYWASKQKNVNKDKRKLSELHSKGYRVLTIEDDEL-NDIDKVKQQIQKFW |
3 | 3r3pA | 0.17 | 0.15 | 5.05 | 1.41 | HHpred | | PERRVKEILDEMDIVYFTHHVVEGWNVA-FYLG------KKLAIEVNGVYWASKQKNVNKDKRKLSELHSKGYRVLTIEDDELND-IDKVKQQIQKFW |
4 | 3r3pA | 0.17 | 0.15 | 5.05 | 2.62 | MUSTER | | PERRVKEILDEMDIVYFTHHVVEGWNVAFYLG-------KKLAIEVNGVYWASKQKNVNKDKRKLSELHSKGYRVLTIEDDELND-IDKVKQQIQKFW |
5 | 3r3pA | 0.17 | 0.15 | 5.05 | 1.08 | CNFpred | | PERRVKEILDEMDIVYFTHHVVEGWNVAFYLG-------KKLAIEVNGVYWASKQKNVNKDKRKLSELHSKGYRVLTIEDDELN-DIDKVKQQIQKFW |
6 | 1cw0A | 0.17 | 0.16 | 5.35 | 2.06 | HHsearch-2 | | IEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEY------RCVIFTHGCFWHHHHCNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERL |
7 | 3r3pA | 0.17 | 0.15 | 5.05 | 2.51 | Neff-PPAS | | PERRVKEILDEMDIVYFTHHVVEGWNVAFYLGK-------KLAIEVNGVYWASKQKNVNKDKRKLSELHSKGYRVLTIEDDELND-IDKVKQQIQKFW |
8 | 3r3pA | 0.17 | 0.15 | 5.04 | 2.81 | HHsearch | | PERRVKEILDEMDIVYFTHHVVEGWNVA-FYLGK------KLAIEVNGVYWASKQKNVNKDKRKLSELHSKGYRVLTIEDDELN-DIDKVKQQIQKF- |
9 | 3r3pA | 0.17 | 0.15 | 5.05 | 1.09 | PROSPECTOR2 | | PERRVKEILDEMDIVYFTHHVVEGWNVAFYLGKK-------LAIEVNGVYWASKQKNVNKDKRKLSELHSKGYRVLTIEDDELND-IDKVKQQIQKFW |
10 | 1cw0A | 0.18 | 0.16 | 5.33 | 1.23 | SAM | | -EKRLASLLTGQGLAFRVQDASLPGRPDFVVDE-------RCVIFTHGCFWHHHHCNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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