Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | LTVTAVSQTIPFGGTIAPYTDTITGFVNGDAPSVVTGAASLTTTPPTPTAPNTYTITAANGTLAASNYSFTFVNGTLT |
1 | 4ng0A | 0.22 | 0.22 | 6.88 | 1.21 | MUSTER | | MKVTYSSDSKTYDGNPANFTVQWSGLKGLNTSTLTSADFTWNTDKKAPTDAGKYTLSLNTTGEANPNYDLKSGSYTYT |
2 | 4ng0A | 0.21 | 0.21 | 6.54 | 1.56 | HHsearch-2 | | MKVTYSGDSKTYDGNPANFTVQWSGLKGLNTSTLTSADFTWNTADKAPTDAGKYTLSLNTTGEANPNYDLKTISYTYT |
3 | 4ng0A | 0.21 | 0.21 | 6.53 | 1.18 | HHsearch | | MKVTYSSDSKTYDGNPANTTVQWSGLKGLNTSTLTSADFTWNTADKAPTDAGKYTLSLNTTGEANPNYDLKTISYTY- |
4 | 5k6xA2 | 0.14 | 0.12 | 3.95 | 0.91 | SPARKS-K | | LVLTCM----AEGSWPL----EFKWLHNNRELTRFSLEYRYMITSLDRTHAGFYRCIVRMGALLQRQTEVQVA----- |
5 | 2edjA | 0.15 | 0.14 | 4.76 | 0.40 | FFAS-3D | | QTLAVDGKCKATGDPLPVISWLKEGFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSSAVLDVTE---- |
6 | 4ng0A | 0.22 | 0.22 | 6.88 | 0.40 | HHpred | | MKVTYGSDSKTYDGNPANTTVQWSGLKGLNTSTLTSADFTWNTADKAPTDAGKYTLSLNTTGEANPNYDLKTISYTYT |
7 | 4m00A3 | 0.28 | 0.24 | 7.45 | 0.93 | MUSTER | | PTVTVGNQTIEVGKTTGTVTNTVTGLPSGLSYDSATNSIIGTPT-----KIGQSTVTVVANNKSTTTFTINVV----- |
8 | 1cwvA | 0.18 | 0.17 | 5.42 | 0.71 | CNFpred | | STLAAVPTSIIADG---LMASTITLELKDTYGDPQAANVAFDTTLGNMG-DGTYSAPLTST--TLGVATVTVKVDGAA |
9 | 1yq8A | 0.19 | 0.18 | 5.77 | 0.45 | HHsearch-2 | | ITVT------DYGDQTDALSLMYSTSTGGPALTDLSGALTVNSVALAAGKSGLYQITMTVNTVTTGNYLLNITAAKIN |
10 | 4ng0A | 0.22 | 0.22 | 6.88 | 0.98 | Neff-PPAS | | MKVTYSSDSKTYDGNPANFTVQWSGLKGLNTSTLTSADFTWNTDKKAPTDAGKYTLSLNALRKANPNYDLKTISGSYT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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