Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | GFKTKAEAEDAAKKVLKEDKVNKSFTVTQGANSNYYFSLS |
1 | 2k49A | 0.17 | 0.17 | 5.72 | 1.71 | SPARKS-K | | LYTGKSGAMNGIESVQTNSPIEARYAKEVAKNDKPYFNLK |
2 | 5up5A | 0.33 | 0.30 | 9.00 | 1.57 | MUSTER | | EFDNEEEARKAEKELRK---ENRRVTVTQ-ENGRWRVTWD |
3 | 2k49A | 0.17 | 0.17 | 5.72 | 1.63 | HHsearch-2 | | LYTGKSGAMNGIESVQTNSPIEARYAKEVAKNDKPYFNLK |
4 | 2k8eA | 0.20 | 0.20 | 6.40 | 1.01 | Neff-PPAS | | LYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNLK |
5 | 2k49A | 0.18 | 0.17 | 5.70 | 2.56 | HHsearch | | LYTGKSGAMNGIESVQTNSPIEARYAKEVAKNDKPYFNL- |
6 | 2k8eA | 0.20 | 0.20 | 6.40 | 1.67 | SPARKS-K | | LYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNLK |
7 | 2k8eA | 0.20 | 0.20 | 6.40 | 1.15 | MUSTER | | LYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNLK |
8 | 2k8eA | 0.20 | 0.20 | 6.40 | 1.56 | HHsearch-2 | | LYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNLK |
9 | 2k8eA | 0.21 | 0.20 | 6.38 | 2.44 | HHsearch | | LYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNL- |
10 | 2j0oA3 | 0.18 | 0.15 | 4.88 | 1.13 | MUSTER | | NTVSQEQANKWLTEL------GTIGKVSQ-KNGGYVVSIN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|