Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | NTLNGDKAHIDSLDRRARALQTSTDSFGVVSTDVASCIKLLDEIANELTKEEEENARNARQRDALSERGNNVREVERTEALLQRQLSKWNERTEKLRDHSREKAQEAKEKMEELRA |
1 | 3na7A1 | 0.10 | 0.09 | 3.54 | 1.09 | SPARKS-K | | -LEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEI-KSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLE |
2 | 2tmaA1 | 0.11 | 0.10 | 3.77 | 1.41 | FFAS-3D | | --KENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALEEAEKAADESERGMKVIE- |
3 | 3na7A | 0.08 | 0.08 | 3.09 | 1.02 | MUSTER | | KAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIRELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNIKETQQIIFK |
4 | 3na7A1 | 0.05 | 0.05 | 2.40 | 1.28 | Neff-PPAS | | PLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALE |
5 | 5vtlA2 | 0.12 | 0.12 | 4.25 | 0.97 | SPARKS-K | | -IPFGVKVLKALAAANVSDASKAREGCQDAVRRAEDAFSSTPKVEEAVGRARAALKEAESAENAAKTALSDVEQYAANAPLLAAQLEAAVRRASEARVAARAAESNARKAAEEAER |
6 | 3na7A1 | 0.07 | 0.07 | 2.81 | 1.37 | FFAS-3D | | --IREKRKDLDKALNDKEAKNKAIL---NLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLAL- |
7 | 2b9cB | 0.13 | 0.13 | 4.47 | 0.31 | HHpred | | QKLEEAEKAADESERGMKVIESRAEKMEIQEIQLKEAKHIAEDAD---RKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEDKLLSKNYHLENEVARLKK |
8 | 4iloA | 0.12 | 0.12 | 4.26 | 0.98 | MUSTER | | NELAKIQALKTDIRRKVEEKEQEMEKLKDQIKGGEKRIQEISDQINKLENQQAAMDEFNALTQEMTAANKERRTLEHQLSDLMDKQAGSEDLLISLKESLSSTENSSSAIEEEIRE |
9 | 5j1iA | 0.14 | 0.14 | 4.72 | 0.65 | CNFpred | | SELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQAVPAELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGERDVEWRERVAQLLE |
10 | 6gmhQ | 0.15 | 0.15 | 4.91 | 0.60 | HHsearch-2 | | SVLKDEKSNLKEVLNAVKELELAHRYFSYAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEK-----ELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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