Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | KLIKIIKNKIVDSGREYLQILLLFISFMFPLFVNMSEIIRTILGGQKPNFDNAKYYYLMLSGNNVIGLLFVLYVLFNFIRKVNKETILNKGNVYHNHTYAWYWFCSKILGYDKCNLVLVPIQMQFKLVVRDTFKEYPFFENMFPNEDCCQVQVTKKSVDNHCNEFTLIIEDTYPIKEKQIPEKYLNIPLIKLTRSCNTVGKRVYNEKFIDAIVQEIRLLPEDSIINIFATTNPKNTYEIAKKGLFLAERSNIIMVNVFQQEGSGERLFKDKPYTVI |
1 | 6oqqA | 0.12 | 0.12 | 4.09 | 0.68 | SPARKS-K | | IPFEATRNELVQIYLTSIDKLIKSSQQIASHYLFLRSLANSETDGIKLSLAKPLGTYLASKEPHVWKMINELIFMLALIHEYHKEPLTKNQSAFVDSSVFLIYTAWLAHSYDSFNPMFYHSTLTDNLLLRTEPKEVTLSSEHHYKKEKGPIDSRYQMSSDRLLRIQLLFST----PQNDV-------VAVKVQKKGEPKSTLEEEFEMADYLLKHQRRLDKLPQPLGQYSVKKSEILEISFERFKTLDDSKDLEVYVYKAPQSYFTYLHDKNQDLE |
2 | 5x5yF | 0.09 | 0.08 | 2.88 | 0.68 | FFAS-3D | | -MI--VFRYLSREVLVTMSAVSAVLLVII-MSGRFIKYLAQAALLDPGSLFLIMAFRIPGFLQLILPLGLFLGILLAYGRLYLESEMTATGMSQKRLLGYTMAPALLVAILVALSLFLAPQGINQFAQDTLTEFDTLVPGRFQAMRDGTRVTYTEELSKDRGELAGIFISQKDL------SNQERGISILVAEKGTQADGSRYLNPRYQAELQWRL--------------STPLLVFVVTLLAVPLSPRQGR------------------------ |
3 | 4jc0A | 0.13 | 0.09 | 3.00 | 0.28 | HHpred | | --------------------------------------------------------------------------------------DLERPYAYRGCTFCSIPS---FKG--S--LRSRSIEREVEDLLKEGKKEIILAQDSYGIDLYQALDLRRLNSLNGEFWI--RVMYLHPLTEEIISAMLELVKYFDVPVQHGSDKGRTKSSEELKKMLSSIRERFPDAVLRTIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDEGTVAFNLKEKV-- |
4 | 4wy9A | 0.09 | 0.08 | 3.04 | 0.66 | MUSTER | | NITKNTEDILASITKEYATQTQGIFGEMIALNKSISGTLTEMFRSTSKLDIDNITNIITNTFAYSNFTYLYLIDPPEYFKEESKFFNTQSGKFVMLYA-----------DEEGIKAIQAS--QVVQDILKKAKYGGRPIKMNLEGQDFDAVNVAIPIFDRKNQVVGVIGMT---LDFSDIDPKGQKYDLRVLLNS---DGFMAIHPN-KNLVLKNLKDINPNKGA-------QETYKAISEGVFNYIASDGDDSYAAINSFKVQDSSW-----AVL |
5 | 5t0oA | 0.09 | 0.08 | 2.87 | 0.80 | CNFpred | | ISVKDAAIQAMQEVSSPVISIVLVLCAVFVPVSFISGFVGEI----------QRQFALTLAISVTISGFVALTLTPSLCALFLRRNEGEPFKFVK-STSVFSAGVAYILKRTIRFVLIFCIMLGAIFYLYKA-----VPNSLVPEEDQGLMISIINLPS-TNGVKDAMAMIGFDLFTSSL---KENAAAMFIGLQD----RNVSADQIIAELNKKFAFD-RNASSVFIGLPPIPGLSITG-----------GFEMYVQNKSG-------------- |
6 | 2pffB | 0.11 | 0.10 | 3.51 | 0.53 | HHsearch-2 | | TTLVNILEWYLLSIPISCPLIGVIQLAHYVVLLFTPGELRSYLKGATGHSQGLVVAIAESWESFFVSVRKAITVLFF-IGVRCYEAYPNT-----SLPPSILE-DSLENNEPMLSISNLTQE-QVQDYVNKTNSHLPAGKQ-VE--------ISLVNGA-----KNLVVSGPSGLDQSRIPFSERKLK---FSNRFLPVASPFHSHLLVPA-SDLINKDLKNN-----VSFNAKDIQIP---VYDTFDGSDLRVLSG--SISERTTQFKATHILDF |
7 | 6d8vA | 0.06 | 0.06 | 2.50 | 0.79 | Neff-PPAS | | RVETLVFDGAKTEARAIASDIAGSVGELAAAARTMSGVLGRGHAGQSTDRAGAINLLKANLEQHGFAFGSWFAEEPKAYDGKDVIDN-TERGGNADGAFTPYWSKDRNGNIQLSTFKADYAAEWYGLAAKSGGAITQPYLAEGTDVPTTMTSIAYPVMSNGRMIGVSGVDISLAALADRLSAVKPFGSGKWLAAPIPELLMKEYDGEGVESVKDALSTGT--PRMIENLTYDGNEPFDRVVYPFSLPDVNAQWLVLVDVPR--------------- |
8 | 2kpoA | 0.12 | 0.05 | 1.66 | 0.38 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------MLLYVLIISN--DKKLIEE------------ARK-MAEKANLELRTVKTED---ELKKLEEFKESQNIKVLIL--------VSNDEELDKAKELAQK--MEIDVRTRKVTSPDEAKRWIKEFSEEGGSLEHHHH----------------HH--- |
9 | 3otgA | 0.07 | 0.06 | 2.55 | 0.69 | SP3 | | PLATAARAAGEGFAGTLRKLGFEPVATGPVFDGFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVV------QEISNYGAGLAALKAG--------IPTI----CHGVGRDTPDDLTRSIEEEVRGQRLGLDLPPGRIDGFGNPFIDI----FPPSLQEPEFRARPRRHELRPVPFAEQGDLPAWLSSR-------DTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDA-DVLVASGPSLDVSGLGEVPANVR |
10 | 3licA | 0.08 | 0.07 | 2.60 | 0.84 | PROSPECTOR2 | | EIEKRLYENLAQESSHSASRLQFLLEHAQANTQGLSDFIGLLADKDDINNPEKLKTVLTNRIQRNPDFFGSAIAF--------KPNTFPNKKLFSGSGFNYLDIGADGYDYTDGNW-------DWWSKAINQVGGYWSKAYFDEGAGNVLITYAVPFGVQPDYFGVTTVD----LALDRLPEQLGIAPLVVLDDQGRLAGWLDKQNIKNIAFATLLNDGQAGQASFV--------------------DDKGTVYLASVAEVAKLKWRV-----VVV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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