Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | RPILVLVGGASGITPEDMTRLNLLFVKVLAPLAQSLGAAVVDGGTDTGIMQLMGQSRAATGTTFPLIGVAPSGKVAIPYPHLPPTKGTALEPHHTHFVLIPGASWGEECPWMADLATLLADGEPSVTVLINGGKVTWRDAEESVRAGRPVLVIAGTGRTADELAKAIRAEAREEGLESRLSPEISSQELGEQAKNLVASGLLRVVDLTEDNDVL |
1 | 6drjA | 0.27 | 0.27 | 8.31 | 1.54 | SPARKS-K | | NLLISVTGGAKNF--YIKTHLKDKFRRGLIKVAQTTGAWILTGGTHAGVMKHVGMAVRDYTGQIVVIGVAPWGVIHNRYSLDEQGRLSCLDINHTHFLLVDDGHYGVEIELRARLEKLISKTIPVVCVVLDGGPGTLNTIYNSMLNHTPCVVLEGSGRLADVIAHVVTMALINRLLKRFFMQEYKNIEWTKKIQDILRMHLLTVFRIDEDKNYD |
2 | 6mixA1 | 0.25 | 0.24 | 7.55 | 1.91 | FFAS-3D | | NLLISVTGGAKNFN--MKPRLKSIFRRGLVKVAQTTGAWIITGGSHTGVMKQVGEAVRDFEGELITIGVATWGTVHRREGLIGQGNLTCLDSNHSHFILVDDGQYGVEIPLRTRLEKFISEQTPIVCVVLEGGPGTLHTIDNATTNGTPCVVVEGSGRVADVIAQVANLPVSDITISETFTESRIVEWTKKIQDIVRRRQLLTVFREGKDGQQ- |
3 | 6drjA | 0.27 | 0.27 | 8.31 | 5.46 | HHpred | | NLLISVTGGAKNFY--IKTHLKDKFRRGLIKVAQTTGAWILTGGTHAGVMKHVGMAVRDYEGQIVVIGVAPWGVIHNPAYYSGQGRLSCLDINHTHFLLVDDGHYGVEIELRARLEKLISKTIPVVCVVLDGGPGTLNTIYNSMLNHTPCVVLEGSGRLADVIAHVASVPVSKRLLKRFFMQEYTELEWTKKIQDILRMPLLTVFRIDEDKYDV |
4 | 6mixA1 | 0.26 | 0.26 | 7.93 | 1.15 | MUSTER | | NLLISVTGGAKNFN--MKPRLKSIFRRGLVKVAQTTGAWIITGGSHTGVMKQVGEAVRDFSGELITIGVATWGTVHRREGLIGQGNLTCLDSNHSHFILVDDGQYGVEIPLRTRLEKFISEQIPIVCVVLEGGPGTLHTIDNATTNGTPCVVVEGSGRVADVIAQVANLPVSDIKLSVFFQEMFRIVEWTKKIQDIVRRQLLTVFREGKDGQQV |
5 | 6co7A | 0.24 | 0.23 | 7.28 | 1.51 | CNFpred | | NLVISVTGGAKSF--VLKPRLREMFRRGLIKAAKTTGAWIITGGTNTGVMKHVGEAVKEQ-TQVNVIGIATWGIVDKQSDLIS-HQGAMLDPNHSHFFLVDDG-YGVEIGMRSRIEEAIMKGVPVVLLVLEGGPNTVATMYELIKKKVPAVVIDGSGRAASVVGFAYNHTIKRNVDGQTINVID-ADKTYSMIKDVLEEKMISVYSLDGEISQD |
6 | 6drjA | 0.27 | 0.27 | 8.18 | 2.22 | HHsearch-2 | | NLLISVTGGAKNFY--IKTHLKDKFRRGLIKVAQTTGAWILTGGTHAGVMKHVGMAVRDYEGQIVVIGVAPWGVIHNRAYYSGQGRLSCLDINHTHFLLVDDGHYGVEIELRARLEKLISKTIPVVCVVLDGGPGTLNTIYNSMLNHTPCVVLEGSGRLADVIAHVASVPVSKRLLKRFFMQEYQIIEWTKKIQDILRMPLLTVFRIDEDKYDV |
7 | 6mixA1 | 0.25 | 0.24 | 7.55 | 1.52 | Neff-PPAS | | NLLISVTGGAKNF--NMKPRLKSIFRRGLVKVAQTTGAWIITGGSHTGVMKQVGEAVRDFSGELITIGVATWGTVHRREGLIGQGNLTCLDSNHSHFILVDDGTYGVEIPLRTRLEKFISEQTPIVCVVLEGGPGTLHTIDNATTNGTPCVVVEGSGRVADVIAQVANLPVSDITISLIQTESRIVEWTKKIQDIVRRRQLLTVFREGKDGQQD |
8 | 6mixA1 | 0.27 | 0.26 | 8.05 | 3.31 | HHsearch | | NLLISVTGGAKNFN--MKPRLKSIFRRGLVKVAQTTGAWIITGGSHTGVMKQVGEAVRDFEGELITIGVATWGTVHFPAEYIGQGNLTCLDSNHSHFILVDDGQYGVEIPLRTRLEKFISIKIPIVCVVLEGGPGTLHTIDNATTNGTPCVVVEGSGRVADVIAQVANLPVSDQKLSVFFQEMFRIVEWTKKIQDIVRRRLLTVFREGKDGQD- |
9 | 6co7A1 | 0.24 | 0.24 | 7.43 | 1.60 | PROSPECTOR2 | | NLVISVTGGAKSFV--LKPRLREMFRRGLIKAAKTTGAWIITGGTNTGVMKHVGEAVKEQDTQVNVIGIATWGIVDKSMEPTPGHQGAMLDPNHSHFFLVTEGKYGVEIGMRSRIEEAIMKVVPVVLLVLEGGPNTVATMYELIKKKVPAVVIDGSGRAASVVGFAYNHTIKRNVDGQTEDEVRAKVVTYSMIKDVLEEKMISVYSLDGEISQL |
10 | 6mixA1 | 0.27 | 0.26 | 7.90 | 2.27 | SAM | | -LLISVTGGAKNFN--MKPRLKSIFRRGLVKVAQTTGAWIITGGSHTGVMKQVGEAVRDFEGELITIGVATWGTVHFPAEYIGQGNLTCLDSNHSHFILVDDGQYGVEIPLRTRLEKFISIKIPIVCVVLEGGPGTLHTIDNATTNGTPCVVVEGSGRVADVIAQVANLPVSDQKLSVFFQEMFRIVEWTKKIQDIVRRQLLTVFREGK----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|